| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 151 [0] | [0] 154 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 151 (1.390) | 75/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 154 total aligned reads displayed.
GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 | gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca > 1:6311950‑M2/50‑50 (MQ=255)gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca < 1:7856784‑M2/1‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt > 1:3386167‑M2/49‑50 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:2144827‑M2/2‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:534573‑M2/2‑1 (MQ=255) ctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccATg > 1:3222645‑M2/48‑50 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:2198444‑M2/46‑50 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg < 1:4074731‑M2/4‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg < 1:2375457‑M2/4‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 1:86965‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 1:1531978‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:7827775‑M2/45‑49 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:72916‑M2/6‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:1652314‑M2/6‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:5062326‑M2/6‑1 (MQ=255) tttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGa < 1:3724682‑M2/7‑1 (MQ=255) tcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAg < 1:2614896‑M2/8‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:3556013‑M2/9‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:7252885‑M2/9‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:4806531‑M2/9‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:3776137‑M2/9‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:3074022‑M2/9‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:4304661‑M2/9‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:6602828‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:1835606‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc < 1:573347‑M2/11‑1 (MQ=255) acacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc < 1:8257316‑M2/11‑1 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt < 1:2864025‑M2/12‑1 (MQ=255) acagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:2584307‑M2/38‑50 (MQ=255) acagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:501460‑M2/38‑50 (MQ=255) cagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:1801511‑M2/37‑49 (MQ=255) agcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCa > 1:5972614‑M2/36‑50 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt < 1:6876573‑M2/16‑1 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt < 1:8143110‑M2/16‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 1:3668182‑M2/17‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 1:6441645‑M2/17‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 1:689435‑M2/34‑49 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 1:340687‑M2/34‑49 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 1:4274221‑M2/34‑49 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa > 1:8254715‑M2/33‑50 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa > 1:1439152‑M2/33‑50 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt < 1:5040364‑M2/19‑1 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt > 1:6601800‑M2/32‑50 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt < 1:5709127‑M2/19‑1 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt < 1:6536104‑M2/19‑1 (MQ=255) aaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:7202046‑M2/30‑49 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATcc < 1:4590546‑M2/21‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa < 1:4584103‑M2/22‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa < 1:2812519‑M2/22‑1 (MQ=255) aagagaatatgggccgaatgaaactcccATGGCGAGTTCTGCATTATcc < 1:6787872‑M2/21‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt > 1:7407887‑M2/27‑50 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 1:7585522‑M2/24‑1 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg > 1:3514481‑M2/26‑50 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg < 1:7884841‑M2/25‑1 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg < 1:796407‑M2/25‑1 (MQ=255) gaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGc < 1:5458950‑M2/26‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa < 1:6147336‑M2/27‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa < 1:489594‑M2/27‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa > 1:3551873‑M2/24‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt < 1:1081592‑M2/29‑1 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:5333645‑M2/22‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt < 1:3679954‑M2/29‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAttt < 1:6078122‑M2/30‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAttt < 1:3415034‑M2/30‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata < 1:4399382‑M2/33‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata < 1:7070632‑M2/33‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata < 1:199995‑M2/33‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata < 1:1291292‑M2/33‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtat < 1:4375847‑M2/32‑1 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat > 1:7412148‑M2/17‑50 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat > 1:1073424‑M2/17‑50 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat < 1:7121145‑M2/34‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:6255485‑M2/35‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:4455425‑M2/35‑1 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt < 1:6713764‑M2/36‑1 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt > 1:8042840‑M2/15‑50 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt > 1:3443091‑M2/15‑50 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:5372274‑M2/14‑50 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:1717346‑M2/37‑1 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:1771365‑M2/13‑49 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:3526048‑M2/39‑1 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:1929670‑M2/39‑1 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:1790649‑M2/39‑1 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 1:3446768‑M2/40‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:7751510‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaa < 1:5541542‑M2/41‑1 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga < 1:2504167‑M2/43‑1 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag > 1:6165342‑M2/8‑49 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaa < 1:6057855‑M2/44‑1 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga > 1:7993845‑M2/7‑49 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:7091671‑M2/45‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:3978388‑M2/45‑1 (MQ=255) cccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaa < 1:5813807‑M2/46‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa < 1:7187569‑M2/47‑1 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:8099063‑M2/2‑48 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:4162798‑M2/2‑48 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAaga < 1:757822‑M2/49‑1 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAaga < 1:1076287‑M2/49‑1 (MQ=255) aTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:4331489/1‑47 (MQ=255) aTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:111649/1‑47 (MQ=255) | GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |