| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 152 [0] | [0] 148 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 146 (1.350) | 78/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 146 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:5708151/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:2675686/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:6732962/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:207655/50‑1 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:6757931/1‑50 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:1531033/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:583942/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:6419891/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:6928355/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:4354398/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1822697/1‑49 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:205182/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:3299862/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:341419/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:1923821/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:5788123/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1559182/1‑50 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:5182498/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:2962283/49‑1 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:5018696/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:5387777/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:2888502/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:3722760/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:1353260/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:1043064/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:3397936/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4857258/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4398824/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4773704/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:7563371/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:8164464/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:6138526/1‑50 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:1221497/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:7580326/50‑1 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:7488070/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:2194527/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:4137741/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:6667354/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:6468597/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:1709177/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:2621563/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:3936061/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:3717046/50‑1 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:8017759/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:4686136/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:7783314/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:5155852/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:5547821/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:4450750/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:2771234/50‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:2940720/50‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC < 1:4176033/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:7996186/50‑1 TCACTTTACATCAGAGATATACCATTCCATATAACGGCTCTGTAGGCCTG > 1:3494220/1‑50 TCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:7201236/1‑50 TCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:7585188/1‑50 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:3641153/49‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:4637380/1‑49 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:466811/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3137689/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:8243316/49‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:4002343/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:3044118/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:5333152/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:7677263/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:1060601/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGG < 1:6748005/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:1378993/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA < 1:8066580/50‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:1510383/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:1483608/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:568461/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:668274/1‑48 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:5593696/1‑50 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:6856422/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:3500098/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:4651498/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:4295479/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:7966562/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:6573767/49‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:2192130/1‑50 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:5044118/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:7106138/1‑50 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:459991/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:2021024/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:5572177/1‑49 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:6135415/1‑50 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:3584990/1‑50 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:3091717/1‑50 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:85155/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:2999271/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:1834329/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 1:1387292/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:27853/49‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:1061175/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:5498315/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:3322045/1‑49 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:7971913/1‑50 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:5289564/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:3617622/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |