| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 152 [0] | [0] 148 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 146 (1.350) | 78/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 148 total aligned reads displayed.
CGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173399‑173497 | taatcattctcgtttacgttatcattcactttacatcagagatataccat > 1:2675686‑M2/50‑50 (MQ=255)taatcattctcgtttacgttatcattcactttacatcagagatataccat < 1:207655‑M2/1‑1 (MQ=255) aatcattctcgtttacgttatcattcactttacatcagagatataccatt > 1:1531033‑M2/49‑50 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTcc < 1:4354398‑M2/4‑1 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:1822697‑M2/47‑49 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa < 1:341419‑M2/5‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:5788123‑M2/45‑49 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:2174412‑M2/45‑49 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa < 1:1923821‑M2/5‑1 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:1559182‑M2/44‑50 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:5182498‑M2/8‑1 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:2962283‑M2/8‑1 (MQ=255) tcgtttacgttatcattcactttacatcagagatataccaTTCCATATaa > 1:5018696‑M2/41‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:5400616‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:4398824‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:4857258‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:4773704‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:2867581‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:1043064‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:3722760‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:1353260‑M2/11‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:1221497‑M2/13‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:7580326‑M2/13‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:8164464‑M2/13‑1 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:7114214‑M2/37‑50 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:1919404‑M2/37‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGcc > 1:7488070‑M2/36‑50 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGcc < 1:2194527‑M2/15‑1 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGcc < 1:4137741‑M2/15‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGccc < 1:5738846‑M2/16‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:2679753‑M2/34‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt < 1:6468597‑M2/17‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt < 1:1709177‑M2/17‑1 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:6754898‑M2/33‑50 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:3717046‑M2/19‑1 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:3936061‑M2/19‑1 (MQ=255) tatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa > 1:8017759‑M2/31‑50 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:7783314‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:5155852‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc > 1:4686136‑M2/30‑50 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg > 1:3541699‑M2/29‑50 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg < 1:6042523‑M2/22‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATAGAACGGCCCTGTACg < 1:6700339‑M2/22‑1 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:4450750‑M2/28‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc < 1:2940720‑M2/24‑1 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 1:6907988‑M2/27‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc < 1:4176033‑M2/23‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt > 1:751772‑M2/26‑50 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:7996186‑M2/25‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:5567926‑M2/25‑1 (MQ=255) tcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg > 1:7585188‑M2/25‑50 (MQ=255) tcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg > 1:2047855‑M2/25‑50 (MQ=255) cactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg > 1:4637380‑M2/24‑49 (MQ=255) cactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg < 1:466811‑M2/26‑1 (MQ=255) cactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg < 1:3641153‑M2/26‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 1:3335931‑M2/27‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 1:8243316‑M2/27‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:3137689‑M2/23‑50 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:3227965‑M2/23‑50 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc < 1:7677263‑M2/29‑1 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc < 1:3044118‑M2/29‑1 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc > 1:4002343‑M2/22‑50 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc < 1:5333152‑M2/29‑1 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:1060601‑M2/21‑50 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACgg < 1:6748005‑M2/31‑1 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa < 1:1378993‑M2/32‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt < 1:1510383‑M2/33‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa < 1:8066580‑M2/34‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:6594900‑M2/35‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:1483608‑M2/16‑49 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:568461‑M2/15‑48 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:668274‑M2/15‑48 (MQ=255) cagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg > 1:6856422‑M2/14‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg < 1:6573767‑M2/37‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:4651498‑M2/38‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:7966562‑M2/38‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:3079031‑M2/13‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:3500098‑M2/38‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:4295479‑M2/38‑1 (MQ=255) agatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt > 1:5044118‑M2/11‑50 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:7106138‑M2/10‑50 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt < 1:3451374‑M2/41‑1 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGttt < 1:459991‑M2/42‑1 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGttt < 1:2021024‑M2/42‑1 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:5572177‑M2/9‑49 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:2988707‑M2/9‑49 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:5663410‑M2/43‑1 (MQ=255) ataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc > 1:85155‑M2/7‑50 (MQ=255) ataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc > 1:6135415‑M2/7‑50 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcg > 1:1387292‑M2/6‑50 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc < 1:1061175‑M2/44‑1 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc < 1:27853‑M2/44‑1 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgcg < 1:2403609‑M2/47‑1 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:3322045‑M2/4‑49 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc < 1:5498315‑M2/46‑1 (MQ=255) caTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:7971913‑M2/3‑50 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:3617622‑M2/2‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:5289564‑M2/2‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc < 1:6206097‑M2/49‑1 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACa < 1:626618/50‑1 (MQ=255) | CGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173399‑173497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |