| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 158 [0] | [0] 158 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 153 (1.480) | 73/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 159 total aligned reads displayed.
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:3780420/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:8103208/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:3328970/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:4000758/1‑50 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:3719363/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT < 1:5483943/50‑1 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:5771365/1‑50 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC < 1:7479035/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:5873778/1‑49 GCAACTGGTGATTTTTATTGATTGCTGAG‑TTTGAATACATTGAACGTCTA < 1:7006086/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:3215693/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:2560935/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:3994757/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:1121920/1‑50 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:228462/1‑49 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:2843099/1‑49 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 1:529513/50‑1 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA > 1:7744484/1‑50 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA > 1:1385697/1‑50 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 1:3232104/50‑1 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC > 1:7129925/1‑50 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC > 1:3335626/1‑50 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:4838214/50‑1 TGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:2374214/1‑50 GGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:7475502/1‑49 GGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:2793867/1‑49 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 1:4186647/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:834921/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 1:5947478/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 1:2561172/50‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:4843792/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:6254484/50‑1 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:3794270/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:712309/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:1900698/49‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:6070818/49‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC > 1:3286802/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:3057152/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:2105646/1‑50 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:7550831/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:4209597/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:3129870/1‑49 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:5728938/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:1924639/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:2384906/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:3011543/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:7816671/50‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:4673708/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:5662640/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:4895423/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC < 1:1003211/49‑1 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC < 1:4301452/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:1458123/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:1649685/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:1950894/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:2042548/49‑1 TTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGC > 1:7952710/1‑50 TTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGC > 1:7736150/1‑50 TTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGC > 1:6766689/1‑50 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:935039/49‑1 cgGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:6538634/48‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:2313080/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:6220167/49‑1 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:3482791/1‑50 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:5036526/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:839978/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:1240150/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:5917503/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:1001026/48‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:3261426/48‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:5997248/1‑50 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:17417/1‑49 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:7364560/1‑49 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:6952361/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:5389411/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:6544050/1‑48 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 1:6375808/49‑1 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:2215576/1‑49 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:6900381/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:5846966/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:4237986/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:4809187/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:786140/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:1274339/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:7438313/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:2888178/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:5085120/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:3464183/1‑49 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:533173/1‑49 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA < 1:3743846/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:4526393/49‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:3642670/49‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:2227041/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:216428/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:5481466/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:6725127/1‑50 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:5724749/1‑50 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:3252627/1‑49 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:8057692/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:7238519/1‑49 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |