| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 158 [0] | [0] 158 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 153 (1.480) | 73/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 158 total aligned reads displayed.
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTC > NC_000913/729315‑729411 | aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:8103208‑M1/50‑1 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:4587711‑M1/50‑1 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:3663111‑M1/50‑2 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:5771365‑M1/1‑46 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:5873778‑M1/1‑45 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAG‑TTTGAATACATTGAAcgtcta < 1:7006086‑M1/50‑7 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta < 1:3994757‑M1/50‑7 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:1121920‑M1/1‑44 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta < 1:2560935‑M1/50‑7 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:1385697‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:7744484‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:7539660‑M1/50‑9 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:3232104‑M1/50‑9 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac < 1:5013240‑M1/50‑10 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac < 1:5763780‑M1/50‑10 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac > 1:5475508‑M1/1‑41 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac > 1:3335626‑M1/1‑41 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac > 1:4777148‑M1/1‑41 (MQ=255) tGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:2374214‑M1/1‑40 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:2793867‑M1/1‑39 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:7475502‑M1/1‑39 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:5596929‑M1/50‑13 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta > 1:834921‑M1/1‑38 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:2561172‑M1/50‑13 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac > 1:4191513‑M1/1‑37 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac < 1:6254484‑M1/50‑14 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac > 1:4843792‑M1/1‑37 (MQ=255) gATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact > 1:712309‑M1/1‑36 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact < 1:1900698‑M1/49‑15 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc > 1:3286802‑M1/1‑34 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:3057152‑M1/1‑32 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:2105646‑M1/1‑32 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg < 1:4209597‑M1/49‑19 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:3129870‑M1/1‑31 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg < 1:7550831‑M1/49‑19 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt > 1:5996791‑M1/1‑30 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:5314107‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa < 1:7816671‑M1/50‑23 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:1924639‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:3011543‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa < 1:2384906‑M1/50‑23 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaa < 1:6708763‑M1/49‑22 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 1:5662640‑M1/1‑26 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac < 1:4301452‑M1/49‑24 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac < 1:1003211‑M1/49‑24 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg < 1:6084789‑M1/50‑26 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:1458123‑M1/49‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:1649685‑M1/49‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:1950894‑M1/49‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:4841735‑M1/49‑25 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc > 1:7952710‑M1/1‑24 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc > 1:7736150‑M1/1‑24 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc > 1:6766689‑M1/1‑24 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct < 1:935039‑M1/49‑28 (MQ=255) cggagTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctca < 1:6538634‑M1/48‑30 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctc < 1:6220167‑M1/49‑29 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctc < 1:2313080‑M1/49‑29 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctc < 1:5865380‑M1/49‑29 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:283906‑M1/1‑21 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:196489‑M1/1‑20 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:3325358‑M1/1‑20 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:3482791‑M1/1‑20 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagga < 1:5036526‑M1/50‑33 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:839978‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:1240150‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:5917503‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag < 1:3261426‑M1/48‑31 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:3915657‑M1/1‑18 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag < 1:1001026‑M1/48‑31 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:4248483‑M1/1‑18 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag < 1:3251148‑M1/48‑31 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:5997248‑M1/1‑17 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:7364560‑M1/1‑16 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:7220514‑M1/1‑16 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:17417‑M1/1‑16 (MQ=255) tttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:6952361‑M1/1‑15 (MQ=255) ttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagca < 1:6375808‑M1/49‑36 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:2215576‑M1/1‑12 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:4016045‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:6900381‑M1/1‑11 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:7438313‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:4809187‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:2888178‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:5085120‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:1274339‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:786140‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:533173‑M1/1‑9 (MQ=255) aCATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg > 1:3182978‑M1/1‑8 (MQ=255) aCATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg > 1:2248112‑M1/1‑8 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa < 1:3743846‑M1/50‑44 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatga < 1:3642670‑M1/49‑43 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:216428‑M1/1‑6 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:6725127‑M1/1‑6 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat < 1:3422183‑M1/50‑45 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:2227041‑M1/1‑6 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:5481466‑M1/1‑6 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:5724749‑M1/1‑5 (MQ=255) tGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:3768872‑M1/1‑4 (MQ=255) tGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:8057692‑M1/1‑4 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:7238519‑M1/1‑2 (MQ=255) | AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTC > NC_000913/729315‑729411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |