| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 145 [0] | [0] 152 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 144 (1.330) | 74/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 144 total aligned reads displayed.
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA < 1:5612698/50‑1AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:6559238/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:7215884/1‑50 GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:6777417/1‑50 GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:7215182/1‑50 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC < 1:6641940/50‑1 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCC < 1:1762432/50‑1 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT < 1:557706/50‑1 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:3630244/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:7706210/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:2962382/50‑1 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG > 1:5275627/1‑50 AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT < 1:2204106/50‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG > 1:5250511/1‑50 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:2980265/50‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG > 1:6467633/1‑50 CGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT > 1:6494552/1‑50 CGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT > 1:7082266/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:5874895/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:2711353/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:2747231/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:2858460/49‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:7184774/50‑1 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:6142324/1‑50 CATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:6674017/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:4345401/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:8044219/50‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:1737966/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:5989261/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:5421391/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:3027961/1‑50 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:682039/49‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:8293217/49‑1 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:5788305/1‑49 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:4037312/1‑49 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:4237714/1‑49 TAATCGGTAAACAGCACCTTTTGAATCCTGTCGTTTGTTTTCGATTTCA > 1:4112976/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:6426880/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:463677/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:5501133/1‑49 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:6047328/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:8178574/1‑50 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:6312359/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:5753476/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:5308213/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:5190977/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:1102656/49‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:2440596/1‑49 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:172398/50‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:2439440/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:2849433/1‑49 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:524849/49‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATA < 1:6795799/50‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATA < 1:5905577/50‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:6480584/1‑49 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:2155188/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:6208612/1‑50 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:4992276/1‑50 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:4823374/1‑50 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:142710/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:8283730/50‑1 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:388260/1‑50 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:5971646/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:3199881/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:320120/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:4465756/1‑49 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:3025495/49‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA < 1:1132427/50‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA < 1:7476479/50‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:3298330/1‑50 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:5169081/50‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:3049447/1‑50 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:6670659/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:7499398/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:7452413/1‑49 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:1824929/50‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA > 1:2086692/1‑50 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA > 1:4823065/1‑50 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:6719348/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:4572642/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT > 1:3596420/1‑50 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:4861871/50‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT > 1:1732557/1‑50 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT > 1:1258111/1‑50 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT > 1:2492485/1‑50 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > 1:3329340/1‑50 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > 1:4440173/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT > 1:4178826/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT > 1:1636311/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:5084316/49‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:3653499/1‑50 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:2122143/1‑50 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:8155702/1‑50 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:165244/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:6206461/50‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAACTATTTGTTT > 1:1378280/1‑50 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT < 1:6970718/50‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > 1:3864233/1‑50 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT < 1:6130636/50‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT < 1:5700858/50‑1 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |