| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 145 [0] | [0] 152 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 144 (1.330) | 74/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 152 total aligned reads displayed.
GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 | aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa > 1:6559238‑M2/50‑50 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt > 1:6777417‑M2/49‑50 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt > 1:7215182‑M2/49‑50 (MQ=255) gcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaATc < 1:6641940‑M2/3‑1 (MQ=255) catcagaaaatcgctcatactttaatcggtaaacagcacctttagaATcc < 1:7194326‑M2/4‑1 (MQ=255) catcagaaaatcgctcatactttaatcggtaaacagcacctttagaATcc < 1:1762432‑M2/4‑1 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt < 1:557706‑M2/5‑1 (MQ=255) tcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTg > 1:8077431‑M2/45‑50 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:3295990‑M2/8‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc > 1:6799220‑M2/43‑50 (MQ=255) gaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCg > 1:5275627‑M2/42‑50 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt > 1:7028665‑M2/41‑50 (MQ=255) aaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtt > 1:193250‑M2/40‑50 (MQ=255) aaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtt < 1:2204106‑M2/11‑1 (MQ=255) atcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttg < 1:2980265‑M2/13‑1 (MQ=255) atcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttg > 1:5250511‑M2/38‑50 (MQ=255) cgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt > 1:7082266‑M2/36‑50 (MQ=255) cgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt > 1:6118356‑M2/36‑50 (MQ=255) cgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt > 1:6494552‑M2/36‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt > 1:482839‑M2/35‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt > 1:5874895‑M2/35‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:2747231‑M2/15‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:2711353‑M2/15‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:2858460‑M2/15‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:3018651‑M2/15‑1 (MQ=255) ctcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGtttt > 1:223370‑M2/34‑50 (MQ=255) tcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc > 1:6162489‑M2/33‑50 (MQ=255) catactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc > 1:6674017‑M2/32‑49 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa < 1:8044219‑M2/20‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt > 1:5731693‑M2/28‑50 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt > 1:3027961‑M2/28‑50 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:5832961‑M2/23‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:5421391‑M2/23‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:5989261‑M2/23‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAtt < 1:296080‑M2/22‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAtt < 1:682039‑M2/22‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAtt < 1:8293217‑M2/22‑1 (MQ=255) ctttaatcggtaaacagcacatttagaATCCTGTCGTTTGTTTTCGAtt < 1:7627531‑M2/22‑1 (MQ=255) tttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt > 1:5788305‑M2/27‑49 (MQ=255) tttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt > 1:4237714‑M2/27‑49 (MQ=255) taatcggtaaacagcaccttttgaATCCTGTCGTTTGTTTTCGATTTCa > 1:4112976‑M2/25‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa > 1:6426880‑M2/25‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa > 1:1573295‑M2/25‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa > 1:463677‑M2/25‑49 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:5308213‑M2/28‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:8178574‑M2/23‑50 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:1102656‑M2/27‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:5190977‑M2/27‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:3845147‑M2/27‑1 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:2440596‑M2/22‑49 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:6308262‑M2/31‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:172398‑M2/31‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAata > 1:2849433‑M2/20‑49 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:524849‑M2/30‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:6480584‑M2/19‑49 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:5905577‑M2/32‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:142710‑M2/33‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa > 1:4992276‑M2/18‑50 (MQ=255) aaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:388260‑M2/17‑50 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:4465756‑M2/16‑49 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:3025495‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:3199881‑M2/35‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:5971646‑M2/35‑1 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa < 1:5013246‑M2/36‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:1345353‑M2/37‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:3905986‑M2/37‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa > 1:558448‑M2/14‑49 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 1:3440245‑M2/39‑1 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:3298330‑M2/12‑50 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 1:5169081‑M2/39‑1 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 1:6670659‑M2/39‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatt < 1:7499398‑M2/40‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:7452413‑M2/11‑49 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:7252564‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:6719348‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta > 1:4314900‑M2/10‑50 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta > 1:4823065‑M2/10‑50 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat > 1:3596420‑M2/9‑50 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 1:4572642‑M2/42‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt > 1:1732557‑M2/8‑50 (MQ=255) tttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt > 1:214673‑M2/7‑50 (MQ=255) tttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt > 1:1258111‑M2/7‑50 (MQ=255) tttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt > 1:2492485‑M2/7‑50 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg > 1:4440173‑M2/6‑50 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:827623‑M2/44‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt > 1:1636311‑M2/5‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt > 1:6446627‑M2/4‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt > 1:2122143‑M2/4‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt > 1:3653499‑M2/4‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt < 1:165244‑M2/46‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt > 1:3189666‑M2/3‑50 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt > 1:1756065‑M2/3‑50 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt < 1:6206461‑M2/48‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:6130636‑M2/49‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:5700858‑M2/49‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:4174936‑M2/2‑50 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:1873942/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:102233/1‑49 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:5444340/1‑49 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:4783928/1‑49 (MQ=255) | GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |