| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 206 [0] | [0] 201 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 193 (1.790) | 75/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 206 total aligned reads displayed.
TTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTAT > NC_000913/389848‑389946 | ttAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt > 1:5267351/1‑50 (MQ=255)ttAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt > 1:8044595/1‑50 (MQ=255) tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt < 1:361099/49‑1 (MQ=255) tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt < 1:5359061/49‑1 (MQ=255) tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt > 1:177506/1‑49 (MQ=255) tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt > 1:4004311/1‑49 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg < 1:1147838‑M1/49‑2 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg < 1:7208832‑M1/49‑2 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg < 1:6736374‑M1/49‑2 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa < 1:7692368‑M1/50‑4 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 1:4209645‑M1/1‑47 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 1:3097140‑M1/1‑47 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 1:4874343‑M1/1‑47 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTga < 1:4319375‑M1/49‑3 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTga < 1:2314109‑M1/49‑3 (MQ=255) tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaat < 1:6131661‑M1/50‑5 (MQ=255) aGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata > 1:912659‑M1/1‑45 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat < 1:6537928‑M1/50‑7 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat < 1:2588160‑M1/50‑7 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata < 1:6673859‑M1/49‑6 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata < 1:2355457‑M1/49‑6 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata < 1:3075132‑M1/49‑6 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatt < 1:7263113‑M1/50‑8 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 1:1737170‑M1/1‑43 (MQ=255) aaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatta < 1:5319298‑M1/50‑9 (MQ=255) aaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatta > 1:3139632‑M1/1‑42 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc < 1:722231‑M1/50‑11 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc < 1:3660769‑M1/50‑11 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc < 1:4223924‑M1/50‑11 (MQ=255) aGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcg < 1:7454149‑M1/50‑12 (MQ=255) gCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgg > 1:5903446‑M1/1‑38 (MQ=255) gCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgg < 1:6968224‑M1/50‑13 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc < 1:7329710‑M1/50‑15 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc < 1:1862918‑M1/50‑15 (MQ=255) ataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcg > 1:1279983‑M1/1‑35 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtt > 1:1071474‑M1/1‑32 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtt < 1:2570924‑M1/49‑18 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtt > 1:3024512‑M1/1‑32 (MQ=255) tttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa > 1:1196597‑M1/1‑30 (MQ=255) tttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa > 1:7952909‑M1/1‑30 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 1:7009250‑M1/1‑29 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 1:47714‑M1/1‑29 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaa < 1:2801078‑M1/49‑21 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaa < 1:2641240‑M1/49‑21 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaat < 1:6794804‑M1/49‑23 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaat < 1:2131227‑M1/49‑23 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatat < 1:5833332‑M1/50‑25 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatat > 1:3832193‑M1/1‑26 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata < 1:6103837‑M1/49‑24 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata < 1:6288375‑M1/49‑24 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata < 1:4523018‑M1/49‑24 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta < 1:5137407‑M1/50‑27 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta < 1:2961052‑M1/50‑27 (MQ=255) tCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta > 1:4694745‑M1/1‑23 (MQ=255) cACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattaca > 1:4368617‑M1/1‑22 (MQ=255) cACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattaca > 1:7901907‑M1/1‑22 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacat < 1:5021925‑M1/50‑30 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacat < 1:7414913‑M1/50‑30 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacat < 1:7063714‑M1/50‑30 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacat > 1:1706528‑M1/1‑21 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattaca < 1:6071889‑M1/49‑29 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattaca < 1:2613576‑M1/49‑29 (MQ=255) aCTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattaca < 1:3469463‑M1/49‑29 (MQ=255) cTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacatt < 1:1931041‑M1/50‑31 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg > 1:1693274‑M1/1‑17 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg > 1:2754533‑M1/1‑17 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg < 1:5286869‑M1/50‑34 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgt < 1:6631611‑M1/49‑33 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgt < 1:4283379‑M1/49‑33 (MQ=255) aaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtgg < 1:5293599‑M1/50‑35 (MQ=255) aaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtgg < 1:3229376‑M1/50‑35 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt > 1:2515168‑M1/1‑15 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt < 1:237831‑M1/50‑36 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt < 1:7031474‑M1/50‑36 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt > 1:7940733‑M1/1‑15 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt > 1:3177876‑M1/1‑15 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt > 1:5038671‑M1/1‑14 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt > 1:3273012‑M1/1‑14 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt > 1:8117206‑M1/1‑14 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt < 1:6392113‑M1/50‑38 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt > 1:563863‑M1/1‑13 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt < 1:4575557‑M1/50‑38 (MQ=255) atTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtttt > 1:3508862‑M1/1‑12 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:1021892‑M1/49‑39 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:540498‑M1/49‑39 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:2545893‑M1/49‑39 (MQ=255) ttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat > 1:5599869‑M1/1‑8 (MQ=255) tAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat < 1:6503682‑M1/49‑43 (MQ=255) tAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat < 1:6917711‑M1/49‑43 (MQ=255) tAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat < 1:2162141‑M1/49‑43 (MQ=255) tAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat < 1:3519122‑M1/49‑43 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc > 1:491684‑M1/1‑6 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatg < 1:681360‑M1/49‑44 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcg < 1:3741252‑M1/50‑46 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcg < 1:8191245‑M1/50‑46 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:1985804‑M1/49‑45 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:7804750‑M1/49‑45 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:4483669‑M1/49‑45 (MQ=255) tCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 1:7202771‑M1/1‑4 (MQ=255) tgaatattatcgggcgttaaaatattacattgtggttttcaatgcgttat > 1:5715945‑M1/1‑1 (MQ=255) | TTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTAT > NC_000913/389848‑389946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |