| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 71 (0.850) +CGAGATGGACG |
41/76 | 0.1 | 59.2% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 127 (1.170) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
Only 100 of 207 total aligned reads displayed.
ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 | atttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgg < 1:212991‑M2/1‑1 (MQ=255)attaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg > 1:2558108/1‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGt < 1:4167422‑M2/2‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:4283222/1‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt < 1:3234865/50‑1 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:7193078/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:7833915/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:2469470/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:1590386/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 1:217549/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc < 1:5501690/49‑1 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTccc > 1:857594‑M2/46‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 1:1427808/1‑50 (MQ=255) taaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcccc < 1:5628709/50‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcccc > 1:3124392‑M2/45‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt < 1:1839647‑M2/7‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt < 1:3317163‑M2/7‑1 (MQ=255) aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt > 1:1985506/1‑50 (MQ=255) aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt > 1:1365154/1‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:823441‑M2/8‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:5792143/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:4736283/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc > 1:6475018/1‑50 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc > 1:6790356/1‑50 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCg < 1:677969‑M2/9‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCg > 1:3880720‑M2/42‑50 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGc > 1:6992315‑M2/41‑50 (MQ=255) ttAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcc > 1:5424730/1‑50 (MQ=255) ttAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcc > 1:3212140/1‑50 (MQ=255) ttAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcc > 1:3946974/1‑50 (MQ=255) cagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGcc > 1:2217315‑M2/40‑50 (MQ=255) tAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGccc > 1:1958475/1‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 1:8078423‑M2/39‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 1:7964027‑M2/39‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGcccc > 1:5970052‑M2/38‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:4641444/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:6605029/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:6700367/1‑50 (MQ=255) aGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCt < 1:5868416/50‑1 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 1:404730/1‑50 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct < 1:7287537‑M2/15‑3 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct < 1:109154‑M2/15‑3 (MQ=255) gggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCctt < 1:5672720‑M2/16‑1 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt > 1:2378932/1‑50 (MQ=255) gCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTg > 1:1011694/1‑50 (MQ=255) gCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTg > 1:5176149/1‑50 (MQ=255) gCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTg < 1:6709419/50‑1 (MQ=255) gctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTgg < 1:687007‑M2/18‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg > 1:6072185/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg < 1:832232/50‑1 (MQ=255) ctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg < 1:6498913‑M2/19‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgggg < 1:3459807/50‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgggg < 1:4720833/50‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:7519697/1‑49 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2841014/1‑47 (MQ=255) tGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga < 1:5266902/50‑1 (MQ=255) tGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGga > 1:3154303/1‑48 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga > 1:1639130‑M2/28‑48 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:634163/1‑50 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag > 1:3582385‑M2/27‑50 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag > 1:5923188‑M2/27‑50 (MQ=255) aCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAgg < 1:6382909/50‑1 (MQ=255) aCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAgg > 1:8098304/1‑50 (MQ=255) ttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAggg > 1:5535656‑M2/25‑50 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg > 1:7387047/1‑50 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg < 1:2072946/50‑1 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:2858412/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt < 1:5098297/50‑1 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGtt < 1:2655685‑M2/28‑1 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:8111526‑M2/29‑1 (MQ=255) aTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:3298874/1‑48 (MQ=255) ttCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg > 1:5012167/1‑50 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCATTTGGGGAGAGGGTTAgg > 1:559366/1‑50 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:1510362‑M2/17‑49 (MQ=255) aCAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTg < 1:960205/50‑1 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 1:2631953‑M2/35‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:121026/1‑48 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGa < 1:459373/50‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGa < 1:2737504/50‑1 (MQ=255) ttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAg > 1:8173864‑M2/15‑50 (MQ=255) ttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAg < 1:1066362‑M2/36‑1 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 1:2807377/1‑50 (MQ=255) tacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg > 1:4600200‑M2/14‑50 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg > 1:7789120/1‑50 (MQ=255) acgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg < 1:6692613‑M2/37‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg > 1:2596511/1‑50 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgggg > 1:2272710‑M2/12‑50 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAggg < 1:2087750‑M2/38‑1 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAggg < 1:747707‑M2/38‑1 (MQ=255) cgcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgggg > 1:909506/1‑49 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:2990224/1‑50 (MQ=255) cacaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:7313441/1‑49 (MQ=255) cacaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:6206821/1‑49 (MQ=255) acaTTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAca < 1:6484563/50‑1 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:7564315/1‑48 (MQ=255) tCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:8115025/1‑48 (MQ=40) tCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:682409/1‑48 (MQ=40) ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:4491835/1‑50 (MQ=255) ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:5211294/1‑50 (MQ=255) cGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:5118063/1‑49 (MQ=255) | ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |