| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 765,208 | Δ5,405 bp | [mngR]–mngB | [mngR], mngA, mngB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 765208 | 770612 | 5405 | 132 [0] | [0] 125 | [mngR]–mngB | [mngR],mngA,mngB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 765207 | 0 (0.000) | 122 (1.150) | 63/96 | 0.0 | 100% | coding (669/723 nt) | mngR | DNA‑binding transcriptional repressor MngR |
| ? | NC_000913 | 770613 = | 0 (0.000) | intergenic (+2/‑845) | mngB/cydA | alpha‑mannosidase/cytochrome bd‑I ubiquinol oxidase subunit I | |||||
Only 100 of 125 total aligned reads displayed.
CCTTTTTTACCCGGCCAGTCACGGACGTTCAGTTACCGGCTTGCCTGAATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > NC_000913/770564‑770661 | gcgatgattttcgctgcgctatcagggtaaattatagtcatcggtattat < 1:4105952‑M2/1‑1 (MQ=255) cgatgattttcgctgcgctatcagggtaaattatagtcatcggtattata < 1:1432516‑M2/2‑1 (MQ=255) atgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAg > 1:1091965‑M2/47‑49 (MQ=255) atgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAg > 1:3388542‑M2/47‑49 (MQ=255) atgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAg > 1:6654849‑M2/47‑49 (MQ=255) atgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAg > 1:1730617‑M2/47‑49 (MQ=255) tgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGc > 1:5391698‑M2/46‑49 (MQ=255) tgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGc > 1:8089424‑M2/46‑49 (MQ=255) tgattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCa < 1:5636145‑M2/5‑1 (MQ=255) gattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa > 1:4935964‑M2/45‑50 (MQ=255) gattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa > 1:5429216‑M2/45‑50 (MQ=255) gattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa > 1:6258865‑M2/45‑50 (MQ=255) gattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa > 1:2645058‑M2/45‑50 (MQ=255) gattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa > 1:232827‑M2/45‑50 (MQ=255) gattttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa > 1:1282079‑M2/45‑50 (MQ=255) attttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCaa < 1:3739170‑M2/6‑1 (MQ=255) attttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt < 1:288815‑M2/7‑1 (MQ=255) attttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt > 1:2634329‑M2/44‑50 (MQ=255) attttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt > 1:7501849‑M2/44‑50 (MQ=255) attttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt > 1:2499278‑M2/44‑50 (MQ=255) attttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt > 1:5450991‑M2/44‑50 (MQ=255) ttttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt > 1:8289574‑M2/43‑49 (MQ=255) ttttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAAt > 1:4703522‑M2/43‑49 (MQ=255) tttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATc > 1:1765769‑M2/42‑49 (MQ=255) ttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCa < 1:3944507‑M2/9‑1 (MQ=255) ttcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCa < 1:6164545‑M2/9‑1 (MQ=255) tcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCaa < 1:170887‑M2/10‑1 (MQ=255) tcgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCaa < 1:198449‑M2/10‑1 (MQ=255) cgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAc > 1:2111483‑M2/39‑50 (MQ=255) cgctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAc > 1:1256112‑M2/39‑50 (MQ=255) gctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAcc > 1:1820329‑M2/38‑50 (MQ=255) gctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAcc > 1:8165778‑M2/38‑50 (MQ=255) gctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAcc < 1:1846628‑M2/13‑1 (MQ=255) gctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAc < 1:7934603‑M2/12‑1 (MQ=255) gctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAc < 1:4986326‑M2/12‑1 (MQ=255) gctgcgctatcagggtaaattatagtcatcggtattaTAG‑AATCAAAcc > 1:6338552‑M2/38‑49 (MQ=255) ctgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAAcc > 1:3259134‑M2/37‑49 (MQ=255) tgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCg > 1:4108888‑M2/36‑49 (MQ=255) tgcgctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCg > 1:7190550‑M2/36‑49 (MQ=255) cgctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAg > 1:314575‑M2/34‑50 (MQ=255) cgctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAg < 1:3128946‑M2/17‑1 (MQ=255) cgctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAg > 1:6634625‑M2/34‑50 (MQ=255) gctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGc > 1:8269439‑M2/33‑50 (MQ=255) gctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGc > 1:7126099‑M2/33‑50 (MQ=255) ctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGc > 1:3394603‑M2/32‑49 (MQ=255) ctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGc > 1:3936544‑M2/32‑49 (MQ=255) ctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGc > 1:4475812‑M2/32‑49 (MQ=255) ctatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGc > 1:7920254‑M2/32‑49 (MQ=255) tatcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCca > 1:2699841‑M2/31‑50 (MQ=255) atcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCca > 1:8203153‑M2/30‑49 (MQ=255) tcagggtaaattatagtcatcggtattaTAGCAATCAACCCGAAGCcaca < 1:2331698‑M2/22‑1 (MQ=255) tcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCcaca > 1:112578‑M2/29‑50 (MQ=255) tcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCca < 1:7323735‑M2/20‑1 (MQ=255) tcagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCca < 1:7949737‑M2/20‑1 (MQ=255) tcagggtaaattatagtcatcggtattaAAGCAATCAAACCGAAGCcac < 1:5936226‑M2/21‑1 (MQ=255) cagggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCcaca > 1:3873773‑M2/28‑49 (MQ=255) agggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACata > 1:5915084‑M2/27‑50 (MQ=255) agggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACat < 1:4924029‑M2/23‑1 (MQ=255) agggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACat < 1:5799005‑M2/23‑1 (MQ=255) gggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACatat < 1:2941555‑M2/25‑1 (MQ=255) gggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACatat < 1:6043146‑M2/25‑1 (MQ=255) ggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATg < 1:4258264‑M2/26‑1 (MQ=255) ggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATg < 1:3986854‑M2/26‑1 (MQ=255) ggtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATg > 1:7037568‑M2/25‑50 (MQ=255) gtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATgc < 1:7272539‑M2/27‑1 (MQ=255) gtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATgc > 1:7225495‑M2/24‑50 (MQ=255) gtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATgc < 1:5353841‑M2/27‑1 (MQ=255) gtaaattatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATgc < 1:8147251‑M2/27‑1 (MQ=255) attatattcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCgg > 1:5621340‑M2/20‑50 (MQ=255) tatagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:6406968‑M2/18‑49 (MQ=255) atagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:7929912‑M2/17‑48 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:6634732‑M2/16‑47 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:1435434‑M2/16‑47 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:2025356‑M2/16‑47 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:5665682‑M2/16‑47 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:4369824‑M2/16‑47 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:5224550‑M2/16‑47 (MQ=255) tagtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAg < 1:185039‑M2/35‑1 (MQ=255) agtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGc > 1:2613103‑M2/15‑46 (MQ=255) gtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGa < 1:196411‑M2/36‑1 (MQ=255) gtcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAt > 1:2870742‑M2/14‑50 (MQ=255) tcatcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAtt < 1:3439442‑M2/38‑1 (MQ=255) atcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgt < 1:322606‑M2/40‑1 (MQ=255) atcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgt < 1:6803170‑M2/40‑1 (MQ=255) atcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgt > 1:133543‑M2/11‑50 (MQ=255) tcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgtt > 1:2187234‑M2/10‑50 (MQ=255) tcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgtt < 1:4742803‑M2/41‑1 (MQ=255) tcggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgtt > 1:5509419‑M2/10‑50 (MQ=255) cggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgtt > 1:3028821‑M2/9‑49 (MQ=255) cggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgtt > 1:6003590‑M2/9‑49 (MQ=255) ggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAttgttg < 1:905821‑M2/42‑1 (MQ=255) ggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGa < 1:7144302‑M2/43‑1 (MQ=255) ggtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGa > 1:7070398‑M2/8‑50 (MQ=255) gtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGa > 1:5594732‑M2/7‑49 (MQ=255) gtattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGa > 1:5489318‑M2/7‑49 (MQ=255) tattaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGAc > 1:2467‑M2/6‑49 (MQ=255) ttaTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACaaa < 1:1247946‑M2/47‑1 (MQ=255) tAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAgg < 1:3357186/49‑1 (MQ=255) tAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAgg < 1:1711341/49‑1 (MQ=255) tAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAgg < 1:5018454/49‑1 (MQ=255) | CCTTTTTTACCCGGCCAGTCACGGACGTTCAGTTACCGGCTTGCCTGAATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > NC_000913/770564‑770661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |