| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 171 [0] | [0] 168 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 167 (1.540) | 76/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 168 total aligned reads displayed.
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722029‑3722124 | atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:7881539‑M2/48‑50 (MQ=255)atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:2777589‑M2/48‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa < 1:4838726‑M2/2‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc < 1:7650532‑M2/3‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt > 1:7223618‑M2/47‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt < 1:8165440‑M2/4‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt > 1:7179842‑M2/47‑50 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 1:7837203‑M2/46‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:5427513‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:2392885‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:1844204‑M2/5‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:3136127‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:6893107‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGa > 1:6316424‑M2/43‑50 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGa > 1:7227223‑M2/43‑50 (MQ=255) gcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt > 1:4197210‑M2/40‑49 (MQ=255) gcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt > 1:227357‑M2/40‑49 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:6592932‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt < 1:7392839‑M2/10‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAt < 1:6749662‑M2/9‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAt < 1:3641088‑M2/9‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta < 1:3348390‑M2/12‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 1:5103553‑M2/13‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 1:5481830‑M2/13‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 1:6240947‑M2/13‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:6554416‑M2/38‑49 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:4598149‑M2/38‑49 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:7763116‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:6262768‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:5012404‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:4944149‑M2/37‑48 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:5199697‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 1:4283506‑M2/36‑50 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:2496903‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:2525966‑M2/15‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 1:1056214‑M2/16‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 1:1851869‑M2/16‑1 (MQ=255) tcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:7459628‑M2/34‑49 (MQ=255) cccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTc < 1:5281569‑M2/17‑1 (MQ=255) cccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTc < 1:480192‑M2/17‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 1:2358825‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg < 1:3876485‑M2/19‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg > 1:7988634‑M2/32‑50 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg < 1:459104‑M2/19‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTAAg < 1:6813666‑M2/19‑1 (MQ=255) cagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAgg > 1:6516078‑M2/31‑50 (MQ=255) agcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGt < 1:5810084‑M2/21‑1 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg > 1:2327834‑M2/29‑50 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg < 1:5027312‑M2/23‑1 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg > 1:6008104‑M2/28‑50 (MQ=255) ctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTggg > 1:3307179‑M2/27‑50 (MQ=255) ctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTggg < 1:1173123‑M2/24‑1 (MQ=255) cctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc > 1:2877446‑M2/25‑50 (MQ=255) cctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc > 1:1493161‑M2/25‑50 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt < 1:7629250‑M2/27‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt > 1:5101210‑M2/24‑50 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt > 1:5552869‑M2/24‑50 (MQ=255) tgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtt > 1:6151985‑M2/23‑50 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 1:3423960‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt < 1:907609‑M2/29‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtt < 1:2697483‑M2/28‑1 (MQ=255) gttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc > 1:2585892‑M2/20‑50 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:2626276‑M2/32‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:7469503‑M2/32‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc < 1:739840‑M2/31‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:5691791‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:455615‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg < 1:5700069‑M2/35‑1 (MQ=255) atttccaacgagaatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg > 1:5392267‑M2/16‑50 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt > 1:4067351‑M2/15‑50 (MQ=255) tccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct > 1:970521‑M2/13‑50 (MQ=255) tccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtc < 1:6480889‑M2/37‑1 (MQ=255) tccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtc < 1:3805832‑M2/37‑1 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct < 1:6710386‑M2/38‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg < 1:2212702‑M2/39‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg < 1:8202061‑M2/39‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGc < 1:3241620‑M2/40‑1 (MQ=255) aacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc > 1:6283006‑M2/10‑50 (MQ=255) aacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc > 1:2740926‑M2/10‑50 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt < 1:528413‑M2/42‑1 (MQ=255) cgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCtt > 1:4964119‑M2/8‑50 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCttt < 1:6407184‑M2/44‑1 (MQ=255) agtatAACTTTGCTTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc > 1:1774044‑M2/6‑50 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:7063020‑M2/45‑1 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:5841019‑M2/45‑1 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:2051949‑M2/45‑1 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:2196902‑M2/45‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg < 1:7018479‑M2/46‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg < 1:4651552‑M2/46‑1 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg < 1:1454333‑M2/47‑1 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg > 1:4000799‑M2/4‑50 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg > 1:1062298‑M2/4‑50 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg > 1:5414022‑M2/4‑50 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg > 1:6145491‑M2/4‑50 (MQ=255) atAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:6427010‑M2/3‑50 (MQ=255) atAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:5059674‑M2/3‑50 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:421578‑M2/2‑49 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTg < 1:2811571‑M2/49‑1 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTg < 1:3168151‑M2/49‑1 (MQ=255) aaCTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTg > 1:2625518/1‑49 (MQ=255) | ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722029‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |