| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 176 [0] | [0] 180 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 165 (1.590) | 77/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 176 total aligned reads displayed.
CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC > NC_000913/2994942‑2995039 | cTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:7236255‑M1/50‑1 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:6789401‑M1/1‑49 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:6730689‑M1/1‑49 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:2662469‑M1/1‑48 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact < 1:2268912‑M1/50‑4 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact < 1:4566281‑M1/50‑4 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:2792269‑M1/1‑47 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:6516448‑M1/1‑47 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:1888863‑M1/1‑47 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac < 1:3897213‑M1/49‑3 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac < 1:7595307‑M1/49‑3 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:4841512‑M1/48‑2 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:5389789‑M1/48‑2 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactt < 1:6699830‑M1/49‑5 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat > 1:5329890‑M1/1‑44 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:4533146‑M1/50‑7 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat > 1:8288143‑M1/1‑44 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:8014759‑M1/50‑8 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt > 1:5927245‑M1/1‑41 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa > 1:7918856‑M1/1‑40 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:5292404‑M1/49‑10 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:6959960‑M1/49‑10 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:4399901‑M1/49‑10 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac < 1:4721349‑M1/50‑12 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa < 1:2306579‑M1/49‑11 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa < 1:7365736‑M1/49‑11 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa < 1:7081637‑M1/49‑11 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa < 1:2201469‑M1/49‑11 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:117394‑M1/49‑13 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:3585928‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:5756891‑M1/49‑14 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact < 1:7047755‑M1/50‑16 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:4259300‑M1/50‑17 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:5555066‑M1/50‑17 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:61441‑M1/50‑17 (MQ=255) ccGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg > 1:5665995‑M1/1‑32 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaa < 1:4746730‑M1/50‑20 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga < 1:3316794‑M1/49‑19 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:7912744‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:7606499‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:3752668‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:2086157‑M1/48‑18 (MQ=255) cTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:4990407‑M1/1‑29 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:1729004‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:4871815‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:2562799‑M1/1‑28 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaata < 1:2734426‑M1/49‑24 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaata < 1:7851788‑M1/49‑24 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaata < 1:146958‑M1/49‑24 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat > 1:2598337‑M1/1‑26 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:5506757‑M1/48‑23 (MQ=255) aGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag > 1:753582‑M1/1‑25 (MQ=255) aGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag > 1:920420‑M1/1‑25 (MQ=255) aGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag > 1:6289830‑M1/1‑25 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataagg > 1:848298‑M1/1‑24 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataagg < 1:1182951‑M1/50‑27 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag < 1:1207435‑M1/49‑26 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag < 1:6616432‑M1/49‑26 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag < 1:5949220‑M1/49‑26 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt < 1:4639210‑M1/50‑28 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:5895390‑M1/1‑22 (MQ=255) ttcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt > 1:3858569‑M1/1‑21 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt < 1:3048123‑M1/49‑30 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:1545832‑M1/1‑19 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:1748522‑M1/1‑19 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt < 1:1204242‑M1/49‑31 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:652843‑M1/49‑34 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc < 1:7337803‑M1/50‑36 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc < 1:2958080‑M1/50‑36 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc > 1:5300943‑M1/1‑15 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:4296343‑M1/49‑35 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:7377197‑M1/49‑35 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:1012434‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:2157516‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:3172963‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct > 1:6645997‑M1/1‑14 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct > 1:3942950‑M1/1‑14 (MQ=255) tCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctgg > 1:5668655‑M1/1‑12 (MQ=255) cTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctggg > 1:6738619‑M1/1‑11 (MQ=255) tataGCCCtcttatttaacaacttgaaaataaggtgtttt < 1:380634‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:7148208‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgg < 1:1128384‑M1/46‑39 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctg < 1:314211‑M1/45‑38 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:4969600‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:2569948‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:887479‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttt < 1:3447143‑M1/39‑32 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg < 1:2512264‑M1/49‑43 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg < 1:4224649‑M1/49‑43 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg < 1:8266146‑M1/49‑43 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:2894460‑M1/1‑6 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:4236462‑M1/1‑6 (MQ=255) aGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:3898694‑M1/1‑5 (MQ=255) aGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:4061117‑M1/1‑5 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgttac < 1:3207285‑M1/50‑47 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta < 1:1659649‑M1/49‑46 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca < 1:7744259‑M1/50‑48 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttac > 1:8223520‑M1/1‑3 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa < 1:4207905‑M1/50‑49 (MQ=255) cacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa > 1:1965476‑M1/1‑1 (MQ=255) | CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC > NC_000913/2994942‑2995039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |