| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,761,993 | Δ8,250 bp | rhsA–yibV | rhsA, yibA, yibJ, yibG, yibS, yibV | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3761993 | 3770242 | 8250 | 149 [0] | [0] 147 | rhsA–yibV | rhsA,yibA,yibJ,yibG,yibS,yibV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 0 (0.000) | 146 (1.380) | 76/96 | 0.0 | 100% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 0 (0.000) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 149 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCA > NC_000913/3761943‑3762040 | cgacgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC > 1:4072167‑M1/1‑50 (MQ=255)cgacgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC < 1:4501748‑M1/50‑1 (MQ=255) cgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtc > 1:4220306‑M1/1‑47 (MQ=255) gaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaa > 1:3718296‑M1/1‑46 (MQ=255) gaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaa < 1:252053‑M1/50‑5 (MQ=255) aGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaat < 1:184490‑M1/50‑6 (MQ=255) gTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaat > 1:4981911‑M1/1‑44 (MQ=255) tCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgat < 1:6320545‑M1/49‑9 (MQ=255) cATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatc < 1:6148299‑M1/49‑10 (MQ=255) cATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatc < 1:3278855‑M1/49‑10 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc < 1:1397519‑M1/49‑11 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc > 1:7506017‑M1/1‑39 (MQ=255) gCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaa > 1:3397418‑M1/1‑37 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaat < 1:4657572‑M1/50‑15 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata < 1:3069510‑M1/50‑16 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata < 1:1234757‑M1/50‑16 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata < 1:3865869‑M1/50‑16 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaat > 1:278431‑M1/1‑35 (MQ=255) gAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataa < 1:7943849‑M1/50‑17 (MQ=255) aGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:4920163‑M1/1‑33 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaag < 1:5592592‑M1/50‑19 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaag < 1:2369035‑M1/50‑19 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaag < 1:1848893‑M1/50‑19 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaag < 1:2719628‑M1/50‑19 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:1203109‑M1/1‑32 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:7269093‑M1/1‑32 (MQ=255) tCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:5937694‑M1/1‑31 (MQ=255) ccTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga > 1:1646496‑M1/1‑30 (MQ=255) ccTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga > 1:6822773‑M1/1‑30 (MQ=255) ccTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga > 1:829955‑M1/1‑30 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagata < 1:1477723‑M1/50‑22 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagata < 1:3491092‑M1/50‑22 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagat < 1:7725447‑M1/49‑21 (MQ=255) tttGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa > 1:708286‑M1/1‑28 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg > 1:1999503‑M1/1‑26 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataat < 1:3190881‑M1/49‑24 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa < 1:337242‑M1/48‑23 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg > 1:1599065‑M1/1‑25 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg < 1:5445071‑M1/49‑25 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca < 1:6729543‑M1/50‑27 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca < 1:7178691‑M1/50‑27 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca > 1:5402268‑M1/1‑24 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca > 1:8191503‑M1/1‑24 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca < 1:2364912‑M1/50‑27 (MQ=255) cGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc > 1:1957408‑M1/1‑22 (MQ=255) cGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc < 1:1073990‑M1/50‑29 (MQ=255) cGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc < 1:4222296‑M1/50‑29 (MQ=255) gAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcc < 1:5584800‑M1/50‑30 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:3515964‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:6198722‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:3534997‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:5069517‑M1/50‑31 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc < 1:1093269‑M1/50‑33 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc < 1:4699981‑M1/50‑33 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct > 1:1700793‑M1/1‑17 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:6306697‑M1/50‑34 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:7025153‑M1/50‑34 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:2600353‑M1/50‑34 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:7501473‑M1/50‑34 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct > 1:1109191‑M1/1‑17 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:784667‑M1/50‑34 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct > 1:7880181‑M1/1‑17 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:6422368‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:2421493‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:5635437‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg > 1:2890447‑M1/1‑16 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg > 1:3854145‑M1/1‑16 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:8263753‑M1/50‑35 (MQ=255) aaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctgg < 1:892409‑M1/50‑36 (MQ=255) aaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt < 1:5048281‑M1/50‑37 (MQ=255) aaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt < 1:1949090‑M1/50‑37 (MQ=255) aaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt < 1:84325‑M1/50‑37 (MQ=255) aaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt < 1:1999784‑M1/50‑37 (MQ=255) atatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtc < 1:1314408‑M1/50‑38 (MQ=255) tatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtca < 1:603085‑M1/50‑39 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt > 1:1446610‑M1/1‑10 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt < 1:1274553‑M1/50‑41 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt < 1:5825396‑M1/50‑41 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt < 1:3369483‑M1/50‑41 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcat < 1:5260586‑M1/49‑40 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcat < 1:3432825‑M1/49‑40 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcat < 1:4707007‑M1/49‑40 (MQ=255) cAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc > 1:2155578‑M1/1‑9 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:1516196‑M1/1‑8 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct < 1:7176822‑M1/50‑43 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattctt < 1:2436325‑M1/50‑44 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattctta < 1:4199519‑M1/50‑45 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:7708076‑M1/1‑6 (MQ=255) aTGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:1670515‑M1/1‑5 (MQ=255) aTGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:4589521‑M1/1‑5 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttagc < 1:2729826‑M1/50‑47 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:6835619‑M1/1‑4 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag < 1:447734‑M1/49‑46 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag < 1:7300375‑M1/49‑46 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagcag < 1:4221878‑M1/50‑49 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagcag < 1:5353436‑M1/50‑49 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagca < 1:8169273‑M1/49‑48 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagca < 1:2834090‑M1/49‑48 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagca < 1:2148764‑M1/49‑48 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagca < 1:905710‑M1/49‑48 (MQ=255) | CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCA > NC_000913/3761943‑3762040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |