Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3423698–3424234 3426804–3424653 420–3107 23 [18] [17] 23 [rrfD]–rrlD [rrfD],rrlD

TGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCA  >  NC_000913/3426798‑3426854
       |                                                 
tGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCg         >  1:2644054/1‑50 (MQ=32)
tGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCg         >  1:811169/1‑50 (MQ=32)
tGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCg         >  1:6650755/1‑50 (MQ=32)
  tttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgtt       >  1:1016775/1‑50 (MQ=38)
    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttg      <  1:997156/49‑1 (MQ=38)
    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttg      <  1:920645/49‑1 (MQ=38)
    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttg      <  1:7245325/49‑1 (MQ=38)
    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttg      <  1:5436691/49‑1 (MQ=38)
    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttg      <  1:6085511/49‑1 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:194787/1‑50 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:7425662/1‑50 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:4655357/1‑50 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:6667369/1‑50 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgt     <  1:5991842/49‑1 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgt     <  1:7103305/49‑1 (MQ=38)
     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgt     <  1:360520/49‑1 (MQ=38)
      aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTc   <  1:6839614/50‑1 (MQ=38)
       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:4624242/1‑48 (MQ=38)
       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:7127978/1‑48 (MQ=38)
       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:4185553/1‑48 (MQ=38)
       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:2796484/1‑48 (MQ=38)
       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt    >  1:2247139/1‑48 (MQ=38)
       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCa  <  1:1549509/50‑1 (MQ=38)
       |                                                 
TGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCA  >  NC_000913/3426798‑3426854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: