| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 102 [0] | [0] 102 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 101 (1.010) | 63/98 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 101 total aligned reads displayed.
CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/508825‑508872‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549617‑549665 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG < 1:445563/50‑1CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG < 1:7354066/49‑1CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG > 1:4777790/1‑49CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG > 1:1480893/1‑49CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG > 1:5568395/1‑49 GTCGGTGGCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:2644909/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGA < 1:5474271/50‑1 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:7606200/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:4920032/1‑49 TCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAA > 1:5884937/1‑50 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACG < 1:4105658/50‑1 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACG > 1:7158067/1‑50 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAAC < 1:6656298/49‑1 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAAC < 1:3829781/49‑1 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAAC < 1:3733025/49‑1 CCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCA < 1:1349305/50‑1 CCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCA < 1:2928835/50‑1 CCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCA < 1:2007647/50‑1 CCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGC > 1:3435263/1‑49 CCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGC > 1:1434276/1‑49 CAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAA > 1:678962/1‑50 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT < 1:2414187/50‑1 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:6799799/1‑50 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:428310/1‑50 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATG < 1:5509614/50‑1 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATG < 1:4565565/50‑1 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:2982312/1‑49 ATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGA < 1:1925329/50‑1 TGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGAC > 1:1560047/1‑50 TGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGAC < 1:6573280/50‑1 CGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGA > 1:6816491/1‑50 CGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACG < 1:488797/49‑1 CGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACG < 1:6141881/49‑1 GCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGAT > 1:3460680/1‑50 CCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATC < 1:6548703/50‑1 CCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGAT > 1:6034881/1‑49 CCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGAT > 1:4589674/1‑49 CACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCA > 1:2058235/1‑50 ACCCTAAAGCAGCGCCTCCGCAATGATGTGGAACGCGCAATGACGATCAT < 1:7448596/50‑1 ACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCAT > 1:6839175/1‑50 ACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCAT < 1:6518274/50‑1 ACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCAT < 1:1252041/50‑1 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC > 1:4136861/1‑50 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC > 1:4609153/1‑50 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC > 1:5691505/1‑50 CCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCC < 1:3936659/50‑1 CCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCC < 1:1468319/50‑1 CCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCC < 1:3297672/50‑1 CCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCC < 1:4848933/50‑1 CTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCA < 1:1587723/50‑1 CTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCA > 1:5482791/1‑50 CTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCA > 1:5134103/1‑50 AAAGCAGCGCATCCGCAATTATGTGGAACGCGCAATGACGATCATCCATC > 1:5888720/1‑50 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC < 1:679478/50‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC > 1:3964273/1‑50 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC < 1:6024103/50‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC > 1:3956435/1‑50 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC < 1:1025860/50‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC < 1:6692480/49‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC < 1:4805776/49‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC < 1:2773807/49‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCAT < 1:316018/48‑1 AGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCT < 1:1940330/50‑1 AGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCT < 1:4537914/50‑1 AGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCT > 1:2550762/1‑50 GCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTC < 1:51145/50‑1 CAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCT < 1:21381/50‑1 AGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTG > 1:2543998/1‑50 AGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTG > 1:5121346/1‑50 AGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTG < 1:734143/50‑1 AGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTG > 1:4966882/1‑50 GCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGC < 1:1432676/50‑1 CGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCT < 1:282376/50‑1 CGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCT < 1:3135177/50‑1 GCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTT < 1:1099924/50‑1 GCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTT < 1:6083009/50‑1 CATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTG < 1:4347459/50‑1 ATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGC > 1:4494073/1‑50 TCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCC < 1:6042532/50‑1 CCGCCATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGC > 1:6878631/1‑48 CCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGC > 1:3133696/1‑48 CGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG < 1:1286320/50‑1 CGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCA < 1:5263449/49‑1 CGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCA < 1:6626558/49‑1 GCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGT < 1:3347529/50‑1 GCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:5087527/1‑49 CAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTA < 1:4046046/50‑1 CAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:4458917/1‑48 CAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:4051150/1‑48 ATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGT < 1:5943742/50‑1 ATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG > 1:6950657/1‑49 TGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTA < 1:6679947/50‑1 TGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTA < 1:6598637/50‑1 TGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTA < 1:6154248/50‑1 ATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGC < 1:1741628/50‑1 ATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAG < 1:5084543/49‑1 GTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCG > 1:2198171/1‑49 TGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA < 1:3922372/50‑1 TGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGC < 1:7254483/49‑1 TGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGC < 1:7256142/49‑1 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/508825‑508872‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549617‑549665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |