| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 102 [0] | [0] 102 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 101 (1.010) | 63/98 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 102 total aligned reads displayed.
TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 | tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:1344718/50‑1 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:445563‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 1:7354066‑M1/49‑2 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 1:4777790‑M1/1‑48 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 1:1480893‑M1/1‑48 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 1:5568395‑M1/1‑48 (MQ=255) gTCGGTGGCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:2644909‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgga < 1:5474271‑M1/50‑4 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:7606200‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:4920032‑M1/1‑47 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa > 1:5884937‑M1/1‑46 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg < 1:4105658‑M1/50‑7 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:7158067‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:6656298‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:3829781‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:3733025‑M1/49‑6 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgca < 1:2007647‑M1/50‑11 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgca < 1:2928835‑M1/50‑11 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgca < 1:1349305‑M1/50‑11 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc > 1:3435263‑M1/1‑40 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc > 1:1434276‑M1/1‑40 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 1:678962‑M1/1‑39 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:428310‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:2414187‑M1/50‑13 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:6799799‑M1/1‑38 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatg < 1:5509614‑M1/50‑14 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:2982312‑M1/1‑37 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga < 1:1925329‑M1/50‑15 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac > 1:1560047‑M1/1‑35 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:6573280‑M1/50‑16 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga > 1:6816491‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:488797‑M1/49‑17 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:6141881‑M1/49‑17 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:3460680‑M1/1‑32 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:6548703‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:6034881‑M1/1‑31 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:4589674‑M1/1‑31 (MQ=255) cACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatca > 1:2058235‑M1/1‑30 (MQ=255) aCCCTAAAGCAGCGCCTCCGCAATGATGTggaacgcgcaatgacgatcat < 1:7448596‑M1/50‑22 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 1:1252041‑M1/50‑22 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat > 1:6839175‑M1/1‑29 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 1:6518274‑M1/50‑22 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:5691505‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:4136861‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:4609153‑M1/1‑28 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcc < 1:3936659‑M1/50‑24 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcc < 1:4848933‑M1/50‑24 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcc < 1:3297672‑M1/50‑24 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcc < 1:1468319‑M1/50‑24 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:1587723‑M1/50‑25 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca > 1:5482791‑M1/1‑26 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca > 1:5134103‑M1/1‑26 (MQ=255) aaaGCAGCGCATCCGCAATTATGTggaacgcgcaatgacgatcatccatc > 1:5888720‑M1/1‑24 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc < 1:6024103‑M1/50‑28 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc < 1:679478‑M1/50‑28 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc > 1:3956435‑M1/1‑23 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc > 1:3964273‑M1/1‑23 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc < 1:1025860‑M1/50‑28 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:6692480‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:4805776‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:2773807‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat < 1:316018‑M1/48‑26 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:1940330‑M1/50‑29 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:4537914‑M1/50‑29 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct > 1:2550762‑M1/1‑22 (MQ=255) gcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctc < 1:51145‑M1/50‑30 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:21381‑M1/50‑31 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg > 1:2543998‑M1/1‑19 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg > 1:5121346‑M1/1‑19 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg < 1:734143‑M1/50‑32 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg > 1:4966882‑M1/1‑19 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc < 1:1432676‑M1/50‑33 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct < 1:282376‑M1/50‑34 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct < 1:3135177‑M1/50‑34 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:1099924‑M1/50‑35 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:6083009‑M1/50‑35 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg < 1:4347459‑M1/50‑36 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:4494073‑M1/1‑14 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcc < 1:6042532‑M1/50‑38 (MQ=255) ccGCCATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:6878631‑M1/1‑12 (MQ=255) ccGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:3133696‑M1/1‑12 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:1286320‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:6626558‑M1/49‑39 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:5263449‑M1/49‑39 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagt < 1:3347529‑M1/50‑41 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:5087527‑M1/1‑10 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagta < 1:4046046‑M1/50‑42 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:4051150‑M1/1‑9 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:4458917‑M1/1‑9 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:5943742‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:6950657‑M1/1‑7 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:6598637‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:6679947‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:6154248‑M1/50‑45 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 1:1741628‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag < 1:5084543‑M1/49‑46 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:2198171‑M1/1‑2 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca < 1:3922372‑M1/50‑50 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 1:7254483‑M1/49‑49 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 1:7256142‑M1/49‑49 (MQ=255) | TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |