| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 88 [0] | [0] 86 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 85 (0.850) | 62/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204300‑2204398 | ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat < 1:234702/50‑1 (MQ=255)ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat > 1:646059/1‑50 (MQ=255)ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat > 1:7194760/1‑50 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt < 1:4736829‑M1/50‑2 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:6282802‑M1/1‑49 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt < 1:3262982‑M1/50‑2 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:1108783‑M1/1‑48 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:1855500‑M1/1‑47 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:3291803‑M1/50‑4 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:2343893‑M1/50‑4 (MQ=255) tCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:2439541‑M1/1‑45 (MQ=255) tCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:5959442‑M1/1‑45 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 1:200045‑M1/49‑6 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 1:4188123‑M1/49‑6 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg > 1:6098413‑M1/1‑43 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg < 1:4013323‑M1/49‑7 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg < 1:4862365‑M1/49‑7 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:3878179‑M1/1‑42 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa < 1:2043893‑M1/50‑9 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat > 1:6445185‑M1/1‑41 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat < 1:3779972‑M1/50‑10 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat > 1:3412580‑M1/1‑41 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat < 1:2546824‑M1/50‑10 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:6354430‑M1/50‑11 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:186084‑M1/50‑11 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg > 1:4617646‑M1/1‑40 (MQ=255) tGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 1:2542320‑M1/1‑39 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:6345468‑M1/49‑12 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg > 1:3133220‑M1/1‑37 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga < 1:5309911‑M1/50‑15 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga < 1:1845833‑M1/50‑15 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga > 1:5006744‑M1/1‑36 (MQ=255) ccGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:3551438‑M1/1‑35 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc < 1:7410940‑M1/50‑17 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac < 1:1300120‑M1/49‑16 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:1278304‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:6206499‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca < 1:1570351‑M1/50‑18 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 1:3735644‑M1/50‑19 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:6504964‑M1/1‑29 (MQ=255) ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattc < 1:5885361‑M1/50‑23 (MQ=255) ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:6998503‑M1/1‑28 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca > 1:7553277‑M1/1‑27 (MQ=255) cgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcac < 1:4065372‑M1/50‑25 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca < 1:6051615‑M1/50‑26 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca < 1:6422484‑M1/50‑26 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca < 1:6800637‑M1/50‑26 (MQ=255) cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat < 1:3309690‑M1/50‑27 (MQ=255) cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat > 1:3667402‑M1/1‑24 (MQ=255) cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat < 1:3194824‑M1/50‑27 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat > 1:892106‑M1/1‑23 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat > 1:2307713‑M1/1‑23 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca < 1:1657022‑M1/50‑29 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca < 1:6202932‑M1/50‑29 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca > 1:1336428‑M1/1‑22 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat < 1:7254685‑M1/50‑30 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat > 1:3899923‑M1/1‑21 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat < 1:1011407‑M1/50‑30 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt < 1:5855451‑M1/50‑31 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt < 1:1261938‑M1/50‑32 (MQ=255) cccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc > 1:2048682‑M1/1‑18 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:5169425‑M1/1‑17 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct < 1:4848304‑M1/50‑34 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc < 1:7553263‑M1/49‑33 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:5289428‑M1/1‑16 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:4752651‑M1/1‑16 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta < 1:4070055‑M1/50‑36 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac < 1:4623625‑M1/50‑37 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac < 1:3531042‑M1/50‑37 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac < 1:42627‑M1/50‑37 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 1:2654849‑M1/50‑38 (MQ=255) ggCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc > 1:3971382‑M1/1‑12 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg > 1:2845119‑M1/1‑11 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc < 1:3364164‑M1/50‑41 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc > 1:4771868‑M1/1‑10 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg < 1:4287167‑M1/50‑42 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta > 1:7568599‑M1/1‑7 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt < 1:2876264‑M1/50‑46 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt > 1:7040143‑M1/1‑5 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt > 1:416679‑M1/1‑5 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt < 1:5827458‑M1/50‑46 (MQ=255) ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:7151613‑M1/1‑4 (MQ=255) tattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:222613‑M1/1‑3 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:7166635‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:1485996‑M1/49‑48 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag < 1:3815329‑M1/50‑50 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca < 1:7232095‑M1/49‑49 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca < 1:5938108‑M1/49‑49 (MQ=255) | ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204300‑2204398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |