| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 88 [0] | [0] 86 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 85 (0.850) | 62/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGT > NC_000913/2236669‑2236767 | taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:4736829‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:6282802‑M2/50‑50 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:3262982‑M2/1‑1 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:1108783‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:1855500‑M2/48‑50 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 1:2343893‑M2/3‑1 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 1:3291803‑M2/3‑1 (MQ=255) tcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:5959442‑M2/46‑50 (MQ=255) tcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:2439541‑M2/46‑50 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:200045‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:4188123‑M2/5‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:6098413‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg < 1:4013323‑M2/6‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg < 1:4862365‑M2/6‑1 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:3878179‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa < 1:2043893‑M2/8‑1 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt < 1:3779972‑M2/9‑1 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:3412580‑M2/42‑50 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:6445185‑M2/42‑50 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt < 1:2546824‑M2/9‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 1:4617646‑M2/41‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:186084‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:6354430‑M2/10‑1 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 1:2542320‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:6345468‑M2/11‑1 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:3133220‑M2/38‑49 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa > 1:5006744‑M2/37‑50 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:5309911‑M2/14‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:1845833‑M2/14‑1 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:3551438‑M2/36‑50 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc < 1:7410940‑M2/16‑1 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc < 1:1300120‑M2/15‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:1278304‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:6206499‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:1570351‑M2/17‑1 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcac < 1:3735644‑M2/18‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:6504964‑M2/30‑50 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:6998503‑M2/29‑49 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 1:5885361‑M2/22‑1 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca > 1:7553277‑M2/28‑50 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:4065372‑M2/24‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca < 1:6051615‑M2/25‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca < 1:6800637‑M2/25‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca < 1:6422484‑M2/25‑1 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:3667402‑M2/25‑50 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat < 1:3309690‑M2/26‑1 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat < 1:3194824‑M2/26‑1 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:892106‑M2/24‑49 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:2307713‑M2/24‑49 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca < 1:6202932‑M2/28‑1 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca < 1:1657022‑M2/28‑1 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca > 1:1336428‑M2/23‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:1011407‑M2/29‑1 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 1:3899923‑M2/22‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:7254685‑M2/29‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 1:5855451‑M2/30‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:1261938‑M2/31‑1 (MQ=255) cccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc > 1:2048682‑M2/19‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:7553263‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:5169425‑M2/18‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 1:4848304‑M2/33‑1 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:5289428‑M2/17‑49 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:4752651‑M2/17‑49 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:4070055‑M2/35‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:42627‑M2/36‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:3531042‑M2/36‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:4623625‑M2/36‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:2654849‑M2/37‑1 (MQ=255) ggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc > 1:3971382‑M2/13‑50 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg > 1:2845119‑M2/12‑50 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 1:3364164‑M2/40‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:4771868‑M2/11‑50 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg < 1:4287167‑M2/41‑1 (MQ=255) ggattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa > 1:7568599‑M2/8‑50 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:2876264‑M2/45‑1 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt > 1:7040143‑M2/6‑50 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:5827458‑M2/45‑1 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt > 1:416679‑M2/6‑50 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:7151613‑M2/5‑50 (MQ=255) tatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:222613‑M2/4‑49 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 1:1485996‑M2/47‑1 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 1:7166635‑M2/47‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 1:5938108‑M2/48‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 1:7232095‑M2/48‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAg < 1:3815329‑M2/49‑1 (MQ=255) tGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt > 1:4823021/1‑50 (MQ=255) | CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGT > NC_000913/2236669‑2236767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |