| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 87 [0] | [0] 89 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 86 (0.970) | 60/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:4768015/50‑1 TCATTTTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:2334731/1‑49 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:3116526/50‑1 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1937188/1‑50 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:5436018/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:6279451/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:5620281/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1530408/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:6468501/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1787824/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:4371801/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:240291/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:5637385/49‑1 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:1234301/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:3026072/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:3140927/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:4811846/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:4096801/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:751393/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:4121099/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:1641624/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:384555/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:3262987/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4951468/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:4618272/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:6236263/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:261649/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:5368906/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:171702/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:3635760/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCat < 1:1756825/50‑3 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:4850019/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:1225734/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:3503051/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:5921280/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:6192869/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:290581/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:5438630/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:2212647/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:1748883/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:4763004/1‑49 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:806314/1‑49 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1060682/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:385876/1‑50 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:1115003/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:1529002/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:492257/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:1371049/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:5358575/50‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:159528/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:839437/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:3192562/1‑50 TCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:5259681/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:5041545/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:73020/49‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:6527705/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:2669724/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3038368/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGG < 1:2985665/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:63588/1‑49 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:3938490/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:4469896/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:6738434/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:2335337/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:4372877/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:4533346/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:4325960/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:788777/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:330856/1‑48 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:3955030/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:1018700/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:4179551/50‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:1809810/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:4096135/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:2485609/50‑1 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:6042292/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:2287107/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 1:5505813/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:5664293/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:1200224/1‑50 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:3056564/50‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:554126/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:5499498/1‑49 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:4529739/1‑49 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:5188124/1‑50 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:924025/1‑49 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |