| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 87 [0] | [0] 89 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 86 (0.970) | 60/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
GCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173401‑173497 | atcattctcgtttacgttatcattcactttacatcagagatataccaTTc < 1:4768015‑M2/3‑1 (MQ=255) tcattttcgtttacgttatcattcactttacatcagagatataccaTTc > 1:2334731‑M2/47‑49 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTcc < 1:3116526‑M2/4‑1 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:5436018‑M2/46‑50 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:1937188‑M2/46‑50 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 1:6279451‑M2/6‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:1530408‑M2/45‑49 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:5620281‑M2/45‑49 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:6468501‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata < 1:1787824‑M2/7‑1 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:4371801‑M2/43‑49 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:240291‑M2/8‑1 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:5637385‑M2/8‑1 (MQ=255) tcgtttacgttatcattcactttacatcagagatataccaTTCCATATaa > 1:1234301‑M2/41‑50 (MQ=255) cgtttacgttatcattcactttacatcagagatataccaTTCCATATAAc > 1:3026072‑M2/40‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:4951468‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:3262987‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:384555‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:4121099‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:1641624‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:4811846‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:3140927‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:4096801‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:751393‑M2/39‑50 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:4618272‑M2/13‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:6236263‑M2/13‑1 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:261649‑M2/37‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGcc > 1:5368906‑M2/36‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGc < 1:171702‑M2/14‑1 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 1:3635760‑M2/35‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACggccat < 1:1756825‑M2/17‑3 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGccc < 1:1225734‑M2/16‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:4850019‑M2/34‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:6192869‑M2/33‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg < 1:3503051‑M2/18‑1 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:5921280‑M2/33‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:2212647‑M2/33‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:5438630‑M2/33‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:290581‑M2/33‑50 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:4763004‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:806314‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:1060682‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:1748883‑M2/19‑1 (MQ=255) tatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa > 1:1115003‑M2/31‑50 (MQ=255) tatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa > 1:385876‑M2/31‑50 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg < 1:1529002‑M2/22‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg < 1:5358575‑M2/22‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg < 1:1371049‑M2/22‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg < 1:492257‑M2/22‑1 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:159528‑M2/28‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc < 1:839437‑M2/24‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt > 1:3192562‑M2/26‑50 (MQ=255) tcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg > 1:5259681‑M2/25‑50 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 1:73020‑M2/27‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:5041545‑M2/23‑50 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:6527705‑M2/21‑50 (MQ=255) ttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:2669724‑M2/20‑49 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACgg < 1:2985665‑M2/31‑1 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:3038368‑M2/19‑50 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa < 1:3938490‑M2/32‑1 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:4469896‑M2/18‑49 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:63588‑M2/18‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:6738434‑M2/17‑49 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:2335337‑M2/35‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:4372877‑M2/16‑49 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:4533346‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:4325960‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:788777‑M2/15‑48 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:330856‑M2/15‑48 (MQ=255) cagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg > 1:3955030‑M2/14‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:1018700‑M2/38‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:4179551‑M2/38‑1 (MQ=255) agatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt > 1:1809810‑M2/11‑50 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:4096135‑M2/10‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:2485609‑M2/43‑1 (MQ=255) ataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc > 1:6042292‑M2/7‑50 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcg < 1:2287107‑M2/45‑1 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcg > 1:5505813‑M2/6‑50 (MQ=255) accaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:5664293‑M2/5‑50 (MQ=255) accaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:1200224‑M2/5‑50 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgcg < 1:3056564‑M2/47‑1 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:5499498‑M2/4‑49 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc < 1:554126‑M2/46‑1 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:4529739‑M2/4‑49 (MQ=255) caTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:5188124‑M2/3‑50 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:924025‑M2/2‑49 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc > 1:423439/1‑49 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc > 1:5260410/1‑49 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACa < 1:356188/50‑1 (MQ=255) | GCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173401‑173497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |