| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 104 [0] | [0] 107 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 84 (1.140) | 47/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 116 total aligned reads displayed.
CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:560639/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:3203958/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:4099087/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:4383111/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:2086993/1‑49 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:1299401/1‑49 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:5317741/1‑49 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 1:811475/50‑1 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG > 1:5484257/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:2454213/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG < 1:1531996/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA < 1:4070423/50‑1 GATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAG < 1:4527288/50‑1 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:779221/1‑50 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:3584120/1‑50 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:2488004/50‑1 TGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:1933962/1‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:1279228/49‑1 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:117117/1‑49 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 1:4403057/1‑49 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:4768002/50‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:5631534/50‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAG < 1:3785191/49‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA > 1:1640538/1‑49 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA > 1:5066833/1‑49 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:2600253/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT > 1:5846834/1‑50 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:4006469/50‑1 TTTACCGCGCTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:1039982/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:2418981/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:5730975/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:5872421/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:4488657/50‑1 TTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA > 1:3840333/1‑50 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGca > 1:5918112/1‑48 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:5041691/49‑1 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:3596324/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCTATTC > 1:3623767/1‑50 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTC > 1:3178894/1‑50 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:487715/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:5252807/49‑1 CGCGCTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:1604254/50‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT > 1:3987969/1‑50 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAATGATAATCGATTCTT > 1:5170219/1‑50 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:5553412/50‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 1:5389989/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:4548268/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:3957751/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:2507490/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT > 1:2919834/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:3013931/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:4123141/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT > 1:4614011/1‑50 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:6469240/1‑50 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:848486/1‑49 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:3504424/1‑49 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGGTTCTTTTTCGA > 1:6325800/1‑50 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:5876821/49‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:3285582/49‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:420973/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 1:1656867/1‑50 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:2805996/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:890387/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 1:6530359/1‑50 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 1:3790149/1‑50 CGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT > 1:360295/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:5912353/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:3392611/1‑50 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT > 1:6638985/1‑50 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT < 1:2642121/50‑1 ATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG > 1:4471379/1‑50 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:2205124/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:493151/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:1117763/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG < 1:28010/49‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG < 1:78402/49‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT < 1:1862260/50‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT < 1:3291059/50‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT < 1:4929193/50‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA < 1:3737475/50‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA < 1:5328616/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:1139885/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:3843438/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:4401894/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:6300983/50‑1 GAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG > 1:1580502/1‑50 GAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG > 1:6245893/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC < 1:6365860/50‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:3888906/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:1014551/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:3231195/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:3541825/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:2855673/49‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG > 1:1845430/1‑50 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG > 1:3064263/1‑50 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:1986250/1‑50 GGTAAGTGCAAAGATAAGCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 1:3379304/50‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC < 1:1795190/50‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:4711717/1‑49 AAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > 1:4403015/1‑50 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |