| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 332,366 | Δ44,951 bp | pdeL–yaiL | 39 genes pdeL, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, mhpC, mhpD, mhpF, mhpE, mhpT, yaiL |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 332366 | 377316 | 44951 | 134 [0] | [0] 133 | pdeL–yaiL | pdeL,yahB,yahC,yahD,yahE,yahF,yahG,yahH,yahI,yahJ,yahK,yahL,yahM,yahN,yahO,prpR,prpB,prpC,prpD,prpE,codB,codA,cynR,cynT,cynS,cynX,lacA,lacY,lacZ,lacI,mhpR,mhpA,mhpB,mhpC,mhpD,mhpF,mhpE,mhpT,yaiL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 128 (1.440) | 69/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 128 total aligned reads displayed.
AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332318‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA > NC_000913/377317‑377364 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 1:4787880/50‑1AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:5481714/1‑50AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 1:3108879/50‑1AATCGACAGGTAATCACTCATACGGAACAGCGATAAAAGATAAAGGTGGA < 1:6315276/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT < 1:5466491/50‑1 TCGACAGGTAATCACTCATACTGAACATCGATAAAAGATAAAGGTGGATA < 1:3929788/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:4107050/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:673390/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:1234532/50‑1 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGCGGAT > 1:671957/1‑48 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:2212485/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG > 1:6697840/1‑50 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:318680/49‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:4415287/50‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT > 1:1899417/1‑50 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:3463765/50‑1 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC > 1:4591178/1‑50 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC < 1:3370949/50‑1 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG > 1:6103440/1‑50 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG < 1:6380916/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:6459541/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:3593103/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT > 1:2329694/1‑50 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:840650/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:5996531/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT > 1:1301225/1‑50 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:1079475/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:4320754/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG > 1:4881036/1‑50 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC > 1:1409641/1‑50 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 1:540701/50‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG < 1:5708411/49‑1 CACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:302555/1‑47 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGA < 1:4961195/50‑1 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAG < 1:3126751/49‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:6255849/1‑50 TCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG > 1:6657417/1‑50 CATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC > 1:4897242/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC > 1:2316112/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC < 1:14392/49‑1 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG < 1:351900/48‑1 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG < 1:3168142/48‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT < 1:5694953/50‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT < 1:6200665/50‑1 ACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 1:3988948/1‑49 ACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 1:1486266/1‑49 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA > 1:949864/1‑50 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:4501341/1‑50 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:3056341/1‑50 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:2822670/1‑50 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:5942903/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 1:4216373/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 1:209391/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:548819/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:778182/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:4130746/48‑1 CAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGA > 1:2649911/1‑50 CAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGA > 1:5575863/1‑50 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:933513/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:1421344/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:1042779/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC > 1:5195716/1‑50 GCGATAAAAGATAGAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG < 1:4578727/50‑1 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG > 1:1028534/1‑50 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC < 1:4715744/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:4957978/1‑49 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:2811710/1‑49 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:3622602/1‑49 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA < 1:3259151/50‑1 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA > 1:3531577/1‑50 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA > 1:6341050/1‑50 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:1757692/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:3604429/50‑1 AAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG > 1:4808841/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:4240357/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:4217774/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:6334640/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG < 1:6590216/49‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG < 1:6065439/49‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:958365/50‑1 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGGGCG < 1:1752579/50‑1 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT < 1:6152057/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:86949/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:6055925/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:4389513/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC > 1:4767914/1‑50 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:6595296/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC > 1:4810513/1‑50 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC > 1:547141/1‑50 AAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:4898216/1‑50 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 1:1648234/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 1:4626/50‑1 AGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTA > 1:4967613/1‑50 GGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:1005557/1‑50 GGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT < 1:4153711/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:5500271/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:756322/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:3768353/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:4003031/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:2905711/1‑48 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332318‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA > NC_000913/377317‑377364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |