| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 107 [0] | [0] 107 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 101 (1.190) | 60/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 109 total aligned reads displayed.
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:2380729/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:6160805/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:4316938/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:2397218/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:5471310/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:5114018/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:4903948/1‑50 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG > 1:1366787/1‑50 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT < 1:3905810/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 1:4463363/1‑50 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:6571628/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:1781608/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:6235332/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:2526109/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:1746522/1‑50 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:4959489/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:3712807/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:417911/1‑49 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:4734086/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:5090493/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:4482392/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:5766363/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:326935/48‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:5457944/48‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:6634126/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:2604724/50‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 1:2255797/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 1:2152547/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:3989939/49‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:4180291/49‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 1:821255/50‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC > 1:2646008/1‑50 TTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT > 1:4977262/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:6445690/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:5831134/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:4079646/1‑50 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT > 1:619198/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT < 1:5698972/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA > 1:4464360/1‑49 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA < 1:1270580/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA > 1:1357224/1‑49 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:2070395/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:4540301/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:2555734/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:383793/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG < 1:4861497/50‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:2216077/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG < 1:1299344/50‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:4141545/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:352038/49‑1 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:4079014/1‑50 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:6559250/1‑50 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:5180241/1‑49 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:2875926/1‑49 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:2898443/1‑49 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:2987885/49‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:3590880/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:2732013/50‑1 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:1249167/1‑49 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:6492362/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:5896038/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:5886728/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:1129707/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:1070610/1‑48 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:5526631/1‑48 AGTTTTGAATACATTGAACGTATACACTTACTCCTGTAAACCGCTCAG < 1:2013065/48‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2169981/1‑50 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 1:2243786/50‑1 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:1202698/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:6726089/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:1362186/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:4941744/1‑48 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:6675072/1‑50 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:563226/1‑50 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG < 1:3306017/49‑1 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:6422729/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG < 1:2508634/49‑1 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:3458516/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:5398654/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:4936858/49‑1 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:5159009/49‑1 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:5218775/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:4555122/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:6662378/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:1232102/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:1928729/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:1404561/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:4384795/49‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:6714539/1‑50 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA < 1:6746819/50‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 1:6339064/50‑1 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:232733/1‑49 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:3594918/1‑49 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:5244968/1‑50 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:5540648/1‑50 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:4460224/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:1694233/1‑49 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:474450/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:1218659/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:5386247/50‑1 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |