| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 100 [0] | [0] 98 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 80 (1.080) | 54/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 120 total aligned reads displayed.
TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:2332774/1‑50TGATATACATTGCCGAACAATGTGGTCTTTAGCTTCATAAGTCGTTCCCT > 1:1176495/1‑50 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:2242573/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:1750739/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:211685/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:4510306/1‑48 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:4629094/1‑48 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:5192038/1‑50 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG < 1:3734790/50‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:1929372/1‑50 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGA < 1:638713/50‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:5895184/49‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:1293558/49‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:6679005/1‑49 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:681014/49‑1 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:1414963/1‑50 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:2947116/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:108458/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:2844404/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:5185170/1‑49 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:2645621/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA < 1:805468/50‑1 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG > 1:158846/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG > 1:4261744/1‑49 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAA < 1:5648806/49‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAA < 1:5639249/49‑1 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG < 1:4756123/50‑1 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG > 1:4387608/1‑50 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG < 1:6488792/50‑1 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG < 1:754749/50‑1 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:6570563/1‑50 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:282809/1‑49 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:463507/50‑1 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:3629773/50‑1 CAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAG > 1:4479020/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT < 1:4376580/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:2965540/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:692352/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:6444160/1‑49 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:549336/1‑50 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:2531247/1‑50 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA < 1:4463669/50‑1 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:5861128/1‑50 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:6738135/1‑50 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATT > 1:4876638/1‑50 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTC < 1:4844126/50‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTC < 1:4323383/50‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:3833547/1‑49 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:3028460/49‑1 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA > 1:5421433/1‑50 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA < 1:3103404/50‑1 CTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC > 1:4136127/1‑50 CTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC > 1:1187694/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG < 1:3931803/49‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC < 1:2486176/48‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:4275096/1‑49 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:4863510/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA > 1:687442/1‑50 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA > 1:6676737/1‑50 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTC < 1:2841659/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTC < 1:5317234/49‑1 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:5572751/1‑50 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:4353016/1‑50 TCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG > 1:1060454/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:1589833/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:2080526/49‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGC < 1:4816853/50‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGC < 1:5401644/50‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG < 1:406911/49‑1 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:5156042/1‑50 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:4623786/1‑50 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:4218671/1‑50 AAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:1473878/1‑49 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCAC < 1:5292652/49‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCAC < 1:2393463/49‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCAC > 1:3545849/1‑49 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA < 1:4147404/50‑1 TCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAC > 1:131268/1‑50 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:184971/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:4156269/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:6285247/49‑1 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:390644/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:4672325/49‑1 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG < 1:2568228/50‑1 CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:3002888/1‑49 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCC > 1:346141/1‑49 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:4663421/50‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:6648882/50‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:6724836/50‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:4296851/50‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA > 1:1400102/1‑49 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA > 1:3088469/1‑49 GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA < 1:1100239/50‑1 GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA > 1:6069352/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:5395017/1‑49 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:374088/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:3227664/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:3586136/1‑48 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:2954405/1‑48 GGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG < 1:2502740/50‑1 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |