| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 100 [0] | [0] 98 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 80 (1.080) | 54/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
AGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGA > NC_000913/2565440‑2565538 | attgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagg < 1:108458‑M2/1‑1 (MQ=255)attgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagg < 1:2947116‑M2/1‑1 (MQ=255)attgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagg < 1:2844404‑M2/1‑1 (MQ=255) ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagga < 1:805468‑M2/2‑1 (MQ=255) ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagg > 1:4261744‑M2/49‑49 (MQ=255) ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagg > 1:158846‑M2/49‑49 (MQ=255) gccgaacaatgtggtctttagtttcataagtcgttccctcaggaaggaa < 1:5648806‑M2/3‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGaaa < 1:5639249‑M2/4‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt > 1:6585481‑M2/46‑50 (MQ=255) cgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATg < 1:4756123‑M2/6‑1 (MQ=255) cgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATg > 1:4387608‑M2/45‑50 (MQ=255) cgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATg < 1:6488792‑M2/6‑1 (MQ=255) cgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATg < 1:754749‑M2/6‑1 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGc < 1:4363349‑M2/7‑1 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGc > 1:6570563‑M2/44‑50 (MQ=255) aacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGc > 1:282809‑M2/43‑49 (MQ=255) acaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGa < 1:463507‑M2/9‑1 (MQ=255) acaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGa < 1:3629773‑M2/9‑1 (MQ=255) caatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAg > 1:4479020‑M2/41‑50 (MQ=255) aatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt < 1:4376580‑M2/11‑1 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt > 1:6444160‑M2/39‑49 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTg < 1:2965540‑M2/12‑1 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTg < 1:692352‑M2/12‑1 (MQ=255) tgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGa > 1:549336‑M2/38‑50 (MQ=255) tgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGa < 1:4463669‑M2/13‑1 (MQ=255) tgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGa > 1:6738135‑M2/38‑50 (MQ=255) tgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGa > 1:2531247‑M2/38‑50 (MQ=255) tgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGa > 1:5861128‑M2/38‑50 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAtt > 1:4876638‑M2/36‑50 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAt < 1:2468173‑M2/14‑1 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt < 1:3028460‑M2/16‑1 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt > 1:4535611‑M2/34‑49 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt > 1:3833547‑M2/34‑49 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt < 1:425833‑M2/16‑1 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtc < 1:4844126‑M2/17‑1 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtc < 1:4323383‑M2/17‑1 (MQ=255) tctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtca < 1:3103404‑M2/18‑1 (MQ=255) tctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtca > 1:5421433‑M2/33‑50 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:1187694‑M2/32‑50 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:4136127‑M2/32‑50 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccg < 1:3931803‑M2/21‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcacc < 1:2486176‑M2/20‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac < 1:6743511‑M2/19‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt < 1:4863510‑M2/22‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt > 1:4275096‑M2/28‑49 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt > 1:156193‑M2/28‑49 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt > 1:2005516‑M2/28‑49 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca > 1:687442‑M2/27‑50 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca > 1:6676737‑M2/27‑50 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtc < 1:5317234‑M2/23‑1 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtc < 1:2841659‑M2/23‑1 (MQ=255) tttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcac > 1:5572751‑M2/26‑50 (MQ=255) ttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc > 1:4353016‑M2/25‑50 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg > 1:1060454‑M2/24‑50 (MQ=255) cataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg < 1:4720719‑M2/27‑1 (MQ=255) cataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg < 1:2080526‑M2/27‑1 (MQ=255) cataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg > 1:1589833‑M2/23‑50 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg < 1:406911‑M2/28‑1 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGc < 1:4816853‑M2/29‑1 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGc < 1:5401644‑M2/29‑1 (MQ=255) taagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:4623786‑M2/21‑50 (MQ=255) taagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:4218671‑M2/21‑50 (MQ=255) taagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:5156042‑M2/21‑50 (MQ=255) aagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:1473878‑M2/20‑49 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac < 1:2393463‑M2/31‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac < 1:5292652‑M2/31‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac > 1:3545849‑M2/19‑49 (MQ=255) gtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACaa < 1:4147404‑M2/33‑1 (MQ=255) tcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAc > 1:131268‑M2/17‑50 (MQ=255) cgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc > 1:5602820‑M2/16‑50 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:4156269‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:184971‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:6285247‑M2/35‑1 (MQ=255) ttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa < 1:5025653‑M2/37‑1 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc > 1:390644‑M2/12‑50 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:882411‑M2/40‑1 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc < 1:4672325‑M2/39‑1 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:2955497‑M2/10‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:3932033‑M2/10‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg < 1:2568228‑M2/41‑1 (MQ=255) tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc > 1:3712748‑M2/9‑50 (MQ=255) caggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc > 1:3002888‑M2/8‑49 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGcc > 1:346141‑M2/7‑49 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:6648882‑M2/45‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:6724836‑M2/45‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:4663421‑M2/45‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:4296851‑M2/45‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa > 1:1400102‑M2/6‑49 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa > 1:3088469‑M2/6‑49 (MQ=255) gaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa < 1:1100239‑M2/46‑1 (MQ=255) gaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:6069352‑M2/5‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:5395017‑M2/4‑49 (MQ=255) agGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa < 1:3227664‑M2/48‑1 (MQ=255) agGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa < 1:374088‑M2/48‑1 (MQ=255) agGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:3586136‑M2/3‑48 (MQ=255) agGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:2954405‑M2/3‑48 (MQ=255) gGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAg < 1:2502740‑M2/49‑1 (MQ=255) gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga < 1:3038859/50‑1 (MQ=255) | AGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGA > NC_000913/2565440‑2565538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |