| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 96 [0] | [0] 96 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 91 (1.050) | 60/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:4167883/50‑1 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA > 1:904198/1‑50 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:890447/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:3907122/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:4619999/1‑50 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:186911/1‑50 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:5747020/49‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:3118154/49‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:5043981/49‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC < 1:79409/48‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC < 1:1820647/48‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:3867158/50‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:6680388/1‑50 GATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:1757585/1‑49 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA < 1:6526541/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:6220927/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:3314009/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA < 1:3434987/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:1263699/49‑1 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:4127219/1‑49 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:492902/1‑49 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:3526122/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA > 1:1523056/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA > 1:3545249/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA < 1:3958214/49‑1 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA > 1:668285/1‑49 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:332085/50‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:6325433/49‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:2992959/49‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:6357098/50‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:538849/50‑1 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA < 1:6450924/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:4119987/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:6720756/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC > 1:5244426/1‑50 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT < 1:474937/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC > 1:3621947/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA < 1:991922/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:3489103/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAA < 1:6480490/50‑1 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:3487100/50‑1 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:6494490/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:564552/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:5288502/50‑1 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG < 1:598337/50‑1 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG > 1:1774871/1‑50 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG > 1:3333497/1‑50 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG > 1:3827928/1‑50 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG > 1:553831/1‑50 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG < 1:5630611/50‑1 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG > 1:245499/1‑50 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG < 1:3927699/50‑1 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG > 1:1476913/1‑50 ATAGCTTTACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:1101477/1‑50 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC < 1:4759732/50‑1 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:4518141/1‑49 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:6463935/1‑49 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:5149633/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:6241559/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:3554038/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT < 1:1383677/50‑1 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT < 1:4465582/50‑1 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATC < 1:6313837/50‑1 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:4704651/1‑49 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:641524/1‑49 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:5462081/1‑48 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:2991044/1‑48 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:76064/1‑48 TCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG > 1:1187120/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:1781601/1‑50 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC > 1:5920360/1‑50 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG < 1:2899743/49‑1 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC < 1:5388443/50‑1 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC > 1:4233658/1‑50 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC < 1:6113823/50‑1 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC > 1:3334367/1‑50 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:5125494/1‑50 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:4752269/1‑50 AATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:1462581/1‑50 AATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:538389/1‑50 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTT < 1:4224934/50‑1 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTT < 1:4655090/50‑1 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA < 1:1208574/50‑1 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA < 1:3999733/50‑1 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:3755366/1‑50 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:292908/1‑50 TGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:1047228/1‑50 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCA < 1:4608610/50‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATC < 1:2221922/49‑1 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGT < 1:3889974/49‑1 ATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGC > 1:4696143/1‑50 ATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG < 1:3056168/49‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT < 1:2690282/50‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > 1:6096908/1‑50 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGC < 1:4084020/49‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGC < 1:5502450/49‑1 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |