| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1811928 | 3 (0.030) | 72 (0.830) | 51/96 | 0.0 | 92.9% | coding (995/1392 nt) | tcyP | cystine/sulfocysteine:cation symporter |
| ? | NC_000913 | 1812046 = | 8 (0.090) | coding (1113/1392 nt) | tcyP | cystine/sulfocysteine:cation symporter | |||||
AATGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCATTGGTCAGAACGGCTGCGCCGGT > NC_000913/1811879‑1811977 | aaTGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAG > 1:658458‑M1/1‑50 (MQ=255)aaTGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAG > 1:3208880‑M1/1‑50 (MQ=255) aTGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGg < 1:2469442‑M1/50‑2 (MQ=255) gtgGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgat > 1:733099‑M1/1‑47 (MQ=255) gtgGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgat > 1:5315362‑M1/1‑47 (MQ=255) tgGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATGGCCAGgatt < 1:1383933‑M1/50‑5 (MQ=255) tgGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgatt < 1:4722756‑M1/50‑5 (MQ=255) tgGAAGCACAAACGCGTCGTATGGGCGTTCCTGAATCCATCGCCAGgatt > 1:135162‑M1/1‑46 (MQ=255) gAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgc > 1:5995380‑M1/1‑44 (MQ=255) gAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgc < 1:481135‑M1/50‑7 (MQ=255) gAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgc < 1:424849‑M1/50‑7 (MQ=255) gAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattg < 1:3793194‑M1/49‑6 (MQ=255) aaGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcg < 1:596841‑M1/50‑8 (MQ=255) aaGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcg < 1:827847‑M1/50‑8 (MQ=255) aaGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgc > 1:5806028‑M1/1‑43 (MQ=255) aGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcga < 1:4621270‑M1/50‑9 (MQ=255) gCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgac < 1:4800281‑M1/50‑10 (MQ=255) gCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgac > 1:168211‑M1/1‑41 (MQ=255) gCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgac < 1:5467586‑M1/50‑10 (MQ=255) cacaAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacg < 1:2297906‑M1/50‑11 (MQ=255) acaAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgc > 1:5260723‑M1/1‑39 (MQ=255) acaAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgc < 1:6171401‑M1/50‑12 (MQ=255) aaaCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctg < 1:4751906‑M1/50‑14 (MQ=255) aaaCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctg > 1:3672995‑M1/1‑37 (MQ=255) aaaCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctg < 1:3632571‑M1/50‑14 (MQ=255) aaaCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctg > 1:3112906‑M1/1‑37 (MQ=255) aaCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctgg < 1:2165361‑M1/50‑15 (MQ=255) aaCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctgg < 1:2846865‑M1/50‑15 (MQ=255) aCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggt < 1:1109756‑M1/50‑16 (MQ=255) aCGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggt < 1:3835469‑M1/50‑16 (MQ=255) cgcgTCGTCTGGGCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTc < 1:176170/50‑1 (MQ=255) gcgTCGTCTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcg > 1:3044486‑M1/1‑33 (MQ=255) cgtcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtat > 1:208811‑M1/1‑29 (MQ=255) cgtcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtat > 1:6015443‑M1/1‑29 (MQ=255) gtcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtatt > 1:2012063‑M1/1‑28 (MQ=255) gtcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtatt > 1:1325938‑M1/1‑28 (MQ=255) tcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattg > 1:630793‑M1/1‑27 (MQ=255) tcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattg > 1:5501628‑M1/1‑27 (MQ=255) tcTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattg < 1:5166938‑M1/50‑24 (MQ=255) cTGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgt > 1:1024493‑M1/1‑26 (MQ=255) tGGGCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgt > 1:1633259‑M1/1‑25 (MQ=255) ggCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgttac > 1:2835714‑M1/1‑23 (MQ=255) ggCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgttac < 1:4459906‑M1/50‑28 (MQ=255) ggCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgtta < 1:5852577‑M1/49‑27 (MQ=255) ggCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgtt < 1:399595‑M1/48‑26 (MQ=255) ggCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAAcc < 1:2865366/48‑1 (MQ=255) gCGTTCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgttacc > 1:3433456‑M1/1‑22 (MQ=255) gCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCaat < 1:1653284/50‑3 (MQ=255) ttCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgtt < 1:1703385‑M1/50‑32 (MQ=255) ttCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgt > 1:123695‑M1/1‑19 (MQ=255) tCCTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgt > 1:2210014‑M1/1‑18 (MQ=255) ccTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgtta < 1:6088040‑M1/49‑33 (MQ=255) ccTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgtta < 1:3640157‑M1/49‑33 (MQ=255) cTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagt < 1:1497229‑M1/50‑35 (MQ=255) cTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagt > 1:3687807‑M1/1‑16 (MQ=255) cTGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgttag < 1:6569265‑M1/49‑34 (MQ=255) tGAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagtt > 1:828326‑M1/1‑15 (MQ=255) gAATCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttc > 1:4223596‑M1/1‑14 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttcc < 1:6440893‑M1/50‑38 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttcc < 1:4665739‑M1/50‑38 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttcc < 1:6044745‑M1/50‑38 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttcc < 1:5374511‑M1/50‑38 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttcc > 1:6690964‑M1/1‑13 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttcc < 1:2982968‑M1/50‑38 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttc < 1:966255‑M1/49‑37 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagttc < 1:5122217‑M1/49‑37 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagtt < 1:1536263‑M1/48‑36 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagtt < 1:5301292‑M1/48‑36 (MQ=255) aaTCCATCGCCAGgattgcgacgctggtcggtattgttaccgttagtt < 1:2381600‑M1/48‑36 (MQ=255) ccATCGCCAGgattgcgacgctggtcggtattgttaccgttagttccg > 1:3012439‑M1/1‑10 (MQ=255) cATCGCCAGgattgcgacgctggtcggtattgttaccgttagttccgcag > 1:1776428‑M1/1‑9 (MQ=255) cATCGCCAGgattgcgacgctggtcggtattgttaccgttagttccgcag < 1:3813188‑M1/50‑42 (MQ=255) aTCGCCAGgattgcgacgctggtcggtattgttaccgttagttccgcagg > 1:1671765‑M1/1‑8 (MQ=255) tCGCCAGgattgcgacgctggtcggtattgttaccgttagttccgcaggc < 1:4276773‑M1/50‑44 (MQ=255) gCCAGgattgcgacgctggtcggtattgttaccgttagttccgcaggcg < 1:5426912‑M1/49‑45 (MQ=255) aGgattgcgacgctggtcggtattgttaccgttagttccgcaggcgttgc < 1:2059963‑M1/50‑49 (MQ=255) aGgattgcgacgctggtcggtattgttaccgttagttccgcaggcgttgc < 1:6693393‑M1/50‑49 (MQ=255) ggattgcgacgctggtcggtattgttaccgttagttccgcaggcgttgcc < 1:4970023‑M1/50‑50 (MQ=255) ggattgcgacgctggtcggtattgttaccgttagttccgcaggcgttgcc > 1:1245432‑M1/1‑1 (MQ=255) ggattgcgacgctggtcggtattgttaccgttagttccgcaggcgttgcc < 1:4021329‑M1/50‑50 (MQ=255) ggattgcgacgctggtcggtattgttaccgttagttccgcaggcgttgcc > 1:3015273‑M1/1‑1 (MQ=255) | AATGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCATTGGTCAGAACGGCTGCGCCGGT > NC_000913/1811879‑1811977 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |