| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1811928 | 3 (0.030) | 72 (0.830) | 51/96 | 0.0 | 92.9% | coding (995/1392 nt) | tcyP | cystine/sulfocysteine:cation symporter |
| ? | NC_000913 | 1812046 = | 8 (0.090) | coding (1113/1392 nt) | tcyP | cystine/sulfocysteine:cation symporter | |||||
CGGTGATGGTTGCGCCTACGGTTGGCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCG > NC_000913/1811997‑1812095 | atgtggaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagg < 1:2469442‑M2/1‑1 (MQ=255) gtggaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGAt > 1:5315362‑M2/48‑50 (MQ=255) gtggaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGAt > 1:733099‑M2/48‑50 (MQ=255) tggaagcacaaacgcgtcgtctgggcgttcctgaatccatggccagGAtt < 1:1383933‑M2/4‑1 (MQ=255) tggaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGAtt < 1:4722756‑M2/4‑1 (MQ=255) tggaagcacaaacgcgtcgtatgggcgttcctgaatccatcgccagGAtt > 1:135162‑M2/47‑50 (MQ=255) gaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTg < 1:3793194‑M2/5‑1 (MQ=255) gaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGc < 1:481135‑M2/6‑1 (MQ=255) gaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGc < 1:424849‑M2/6‑1 (MQ=255) gaagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGc > 1:5995380‑M2/45‑50 (MQ=255) aagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGc > 1:5806028‑M2/44‑49 (MQ=255) aagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCg < 1:596841‑M2/7‑1 (MQ=255) aagcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCg < 1:827847‑M2/7‑1 (MQ=255) agcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGa < 1:4621270‑M2/8‑1 (MQ=255) gcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGAc > 1:168211‑M2/42‑50 (MQ=255) gcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGAc < 1:5467586‑M2/9‑1 (MQ=255) gcacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGAc < 1:4800281‑M2/9‑1 (MQ=255) cacaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACg < 1:2297906‑M2/10‑1 (MQ=255) acaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGc < 1:6171401‑M2/11‑1 (MQ=255) acaaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGc > 1:5260723‑M2/40‑50 (MQ=255) aaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTg < 1:3632571‑M2/13‑1 (MQ=255) aaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTg > 1:3672995‑M2/38‑50 (MQ=255) aaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTg > 1:3112906‑M2/38‑50 (MQ=255) aaacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTg < 1:4751906‑M2/13‑1 (MQ=255) aacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTgg < 1:2165361‑M2/14‑1 (MQ=255) aacgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTgg < 1:2846865‑M2/14‑1 (MQ=255) acgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGt < 1:3835469‑M2/15‑1 (MQ=255) acgcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGt < 1:1109756‑M2/15‑1 (MQ=255) gcgtcgtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCg > 1:3044486‑M2/34‑50 (MQ=255) cGGTTGGCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCg < 1:4905174/48‑1 (MQ=255) cgtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTAt > 1:6015443‑M2/30‑50 (MQ=255) cgtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTAt > 1:208811‑M2/30‑50 (MQ=255) gtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTAtt > 1:1325938‑M2/29‑50 (MQ=255) gtctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTAtt > 1:2012063‑M2/29‑50 (MQ=255) tctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTg > 1:630793‑M2/28‑50 (MQ=255) tctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTg < 1:5166938‑M2/23‑1 (MQ=255) tctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTg > 1:5501628‑M2/28‑50 (MQ=255) ggCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTg < 1:3978792/49‑1 (MQ=255) ggCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTg < 1:5355541/49‑1 (MQ=255) ctgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGt > 1:1024493‑M2/27‑50 (MQ=255) tgggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGt > 1:1633259‑M2/26‑49 (MQ=255) ggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGtt < 1:399595‑M2/25‑1 (MQ=255) ggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTa < 1:5852577‑M2/26‑1 (MQ=255) ggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTAc > 1:2835714‑M2/24‑50 (MQ=255) ggcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTAc < 1:4459906‑M2/27‑1 (MQ=255) aTTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTGTTAc < 1:5348909/50‑1 (MQ=255) gcgttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTAcc > 1:3433456‑M2/23‑50 (MQ=255) ttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGtt < 1:1703385‑M2/31‑1 (MQ=255) ttcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGt > 1:123695‑M2/20‑49 (MQ=255) tcctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGt > 1:2210014‑M2/19‑48 (MQ=255) cctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTa < 1:6088040‑M2/32‑1 (MQ=255) cctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTa < 1:3640157‑M2/32‑1 (MQ=255) ctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAg < 1:6569265‑M2/33‑1 (MQ=255) ctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGt < 1:1497229‑M2/34‑1 (MQ=255) ctgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGt > 1:3687807‑M2/17‑50 (MQ=255) tgaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGtt > 1:828326‑M2/16‑50 (MQ=255) gaatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTc > 1:4223596‑M2/15‑50 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGtt < 1:5301292‑M2/35‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGtt < 1:1536263‑M2/35‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGtt < 1:2381600‑M2/35‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTcc < 1:2982968‑M2/37‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTcc > 1:6690964‑M2/14‑50 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTcc < 1:6440893‑M2/37‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTcc < 1:6044745‑M2/37‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTcc < 1:4665739‑M2/37‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTcc < 1:5374511‑M2/37‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTc < 1:966255‑M2/36‑1 (MQ=255) aatccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTc < 1:5122217‑M2/36‑1 (MQ=255) ccatcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCg > 1:3012439‑M2/11‑48 (MQ=255) catcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAg < 1:3813188‑M2/41‑1 (MQ=255) catcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAg > 1:1776428‑M2/10‑50 (MQ=255) ccGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAgg < 1:5646005/50‑1 (MQ=255) atcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAgg > 1:1671765‑M2/9‑50 (MQ=255) tcgccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGc < 1:4276773‑M2/43‑1 (MQ=255) cGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGc < 1:308788/50‑1 (MQ=255) cGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGc < 1:273257/50‑1 (MQ=255) gccagGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCg < 1:5426912‑M2/44‑1 (MQ=255) tgtgGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGtt > 1:4891103/1‑50 (MQ=255) agGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGc < 1:2059963‑M2/48‑1 (MQ=255) agGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGc < 1:6693393‑M2/48‑1 (MQ=255) gGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGcc > 1:3015273‑M2/2‑50 (MQ=255) gGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGcc > 1:1245432‑M2/2‑50 (MQ=255) gGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGcc < 1:4970023‑M2/49‑1 (MQ=255) gGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGcc < 1:4021329‑M2/49‑1 (MQ=255) gATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCg > 1:6377192/1‑50 (MQ=255) | CGGTGATGGTTGCGCCTACGGTTGGCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCG > NC_000913/1811997‑1812095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |