| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 91 [0] | [0] 92 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 90 (1.020) | 57/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
CAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165101‑2165199 | caggcaTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGa < 1:108223/50‑1 (MQ=255) aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa < 1:3017433‑M1/50‑2 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat < 1:4263280‑M1/50‑3 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat > 1:5630944‑M1/1‑48 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat < 1:1536626‑M1/50‑3 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat < 1:4623038‑M1/50‑3 (MQ=255) ggCAGCAGAAAATCGCTCATACTTTAATCGGTAAACAGCGCCTTTAGAat < 1:6608511‑M1/50‑3 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct < 1:2171569‑M1/50‑6 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct > 1:6135676‑M1/1‑45 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct > 1:258225‑M1/1‑45 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc > 1:6718610‑M1/1‑42 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 1:3092535‑M1/50‑9 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 1:3851586‑M1/50‑9 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcg > 1:5361193‑M1/1‑41 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt > 1:2198824‑M1/1‑40 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt < 1:5339033‑M1/50‑11 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt < 1:6615504‑M1/50‑11 (MQ=255) aaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtt < 1:3995750‑M1/50‑12 (MQ=255) aaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgttt < 1:915505‑M1/50‑13 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttg > 1:4573181‑M1/1‑37 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:209842‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:3354654‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt > 1:3122645‑M1/1‑34 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:594671‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtt < 1:2415426‑M1/49‑16 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt > 1:3350188‑M1/1‑33 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt > 1:5503706‑M1/1‑33 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt > 1:638715‑M1/1‑33 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga < 1:1068371‑M1/50‑21 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga < 1:2808962‑M1/50‑21 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga > 1:1293550‑M1/1‑30 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 1:6526913‑M1/48‑19 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:6575860‑M1/50‑22 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:2768442‑M1/50‑22 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:5996327‑M1/50‑22 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt < 1:1108505‑M1/50‑24 (MQ=255) tttAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt > 1:854070‑M1/1‑26 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttca > 1:1080338‑M1/1‑24 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa > 1:2318335‑M1/1‑23 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 1:3718223‑M1/49‑27 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa < 1:4354608‑M1/50‑29 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:3961421‑M1/1‑22 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa < 1:2292865‑M1/50‑29 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:3169450‑M1/1‑22 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:1328378‑M1/1‑22 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa < 1:1642307‑M1/50‑29 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa < 1:542885‑M1/50‑29 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:5790101‑M1/49‑28 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:243288‑M1/49‑28 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaat < 1:6084444‑M1/50‑30 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaat < 1:5548110‑M1/50‑30 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:2597416‑M1/1‑21 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatat < 1:902100‑M1/50‑32 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaata < 1:143216‑M1/49‑31 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatata < 1:921184‑M1/50‑33 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatata < 1:5789329‑M1/50‑33 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatat > 1:5807588‑M1/1‑18 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa > 1:2781327‑M1/1‑17 (MQ=255) aaaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat > 1:3437210‑M1/1‑16 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg < 1:488469‑M1/50‑36 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:2072529‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat > 1:4794811‑M1/1‑15 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:295524‑M1/49‑35 (MQ=255) aCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg > 1:1346542‑M1/1‑14 (MQ=255) aCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg > 1:6638541‑M1/1‑14 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:2321508‑M1/50‑38 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatga > 1:64974‑M1/1‑13 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatga > 1:1276991‑M1/1‑13 (MQ=255) aGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaa < 1:1668711‑M1/50‑39 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatt < 1:3204461‑M1/50‑41 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat > 1:3597443‑M1/1‑10 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta < 1:106609‑M1/50‑42 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta < 1:5299283‑M1/50‑42 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta < 1:194093‑M1/50‑42 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta > 1:6227529‑M1/1‑9 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta < 1:2629537‑M1/50‑42 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta < 1:3895203‑M1/50‑42 (MQ=255) ccTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattat > 1:3238315‑M1/1‑8 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt < 1:4648101‑M1/50‑44 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt > 1:2113108‑M1/1‑7 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt > 1:4146871‑M1/1‑7 (MQ=255) tttAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt > 1:5962808‑M1/1‑6 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:694747‑M1/48‑45 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:5780174‑M1/48‑45 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:2816070‑M1/48‑45 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt < 1:6509505‑M1/50‑49 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt < 1:4045189‑M1/49‑48 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt < 1:5893091‑M1/49‑48 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt > 1:3470879‑M1/1‑1 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 1:3929389‑M1/50‑50 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 1:1411294‑M1/50‑50 (MQ=255) | CAGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165101‑2165199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |