| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 91 [0] | [0] 92 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 90 (1.020) | 57/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 | aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa < 1:3017433‑M2/1‑1 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt < 1:4623038‑M2/2‑1 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt < 1:4263280‑M2/2‑1 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt > 1:5630944‑M2/49‑50 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt < 1:1536626‑M2/2‑1 (MQ=255) ggcagcagaaaatcgctcatactttaatcggtaaacagcgcctttagaAt < 1:6608511‑M2/2‑1 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt > 1:6135676‑M2/46‑50 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt > 1:258225‑M2/46‑50 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt < 1:2171569‑M2/5‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:3851586‑M2/8‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:3092535‑M2/8‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc > 1:6718610‑M2/43‑50 (MQ=255) gaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCg > 1:5361193‑M2/42‑50 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt < 1:5339033‑M2/10‑1 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt > 1:2198824‑M2/41‑50 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt < 1:6615504‑M2/10‑1 (MQ=255) aaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtt < 1:3995750‑M2/11‑1 (MQ=255) aatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgttt < 1:915505‑M2/12‑1 (MQ=255) atcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttg > 1:4573181‑M2/38‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:3354654‑M2/16‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:594671‑M2/16‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:209842‑M2/16‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt > 1:3122645‑M2/35‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:2415426‑M2/15‑1 (MQ=255) ctcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGtttt > 1:3350188‑M2/34‑50 (MQ=255) ctcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGtttt > 1:5503706‑M2/34‑50 (MQ=255) ctcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGtttt > 1:638715‑M2/34‑50 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:6526913‑M2/18‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa < 1:2808962‑M2/20‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:1293550‑M2/31‑50 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa < 1:1068371‑M2/20‑1 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:5996327‑M2/21‑1 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:2768442‑M2/21‑1 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:6575860‑M2/21‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:1108505‑M2/23‑1 (MQ=255) tttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt > 1:854070‑M2/27‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa > 1:1080338‑M2/25‑49 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa > 1:2318335‑M2/24‑49 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa < 1:3718223‑M2/26‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:542885‑M2/28‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:3169450‑M2/23‑50 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:3961421‑M2/23‑50 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:4354608‑M2/28‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:1328378‑M2/23‑50 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:2292865‑M2/28‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:1642307‑M2/28‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:5790101‑M2/27‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:243288‑M2/27‑1 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:2597416‑M2/22‑49 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAat < 1:5548110‑M2/29‑1 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAat < 1:6084444‑M2/29‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:902100‑M2/31‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:143216‑M2/30‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:5807588‑M2/19‑49 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:5789329‑M2/32‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:921184‑M2/32‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa > 1:2781327‑M2/18‑50 (MQ=255) aaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:3437210‑M2/17‑50 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:2072529‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:295524‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:4794811‑M2/16‑49 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:488469‑M2/35‑1 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg > 1:1346542‑M2/15‑49 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg > 1:6638541‑M2/15‑49 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:2321508‑M2/37‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa > 1:1276991‑M2/14‑49 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa > 1:64974‑M2/14‑49 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 1:1668711‑M2/38‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatt < 1:3204461‑M2/40‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:3597443‑M2/11‑49 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:194093‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:106609‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:2629537‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta > 1:6227529‑M2/10‑50 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:5299283‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:3895203‑M2/41‑1 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat > 1:3238315‑M2/9‑50 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 1:4648101‑M2/43‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt > 1:4146871‑M2/8‑50 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt > 1:2113108‑M2/8‑50 (MQ=255) tttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt > 1:5962808‑M2/7‑50 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:5780174‑M2/44‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:694747‑M2/44‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:2816070‑M2/44‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt < 1:6509505‑M2/48‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 1:4045189‑M2/47‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 1:5893091‑M2/47‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:3470879‑M2/2‑50 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:3929389‑M2/49‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:1411294‑M2/49‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:6039876/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:6049420/1‑49 (MQ=255) | GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |