| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 79 [0] | [0] 79 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 77 (1.200) | 53/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA > NC_000913/2998869‑2998916 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:2333788/1‑50GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC < 1:171345/50‑1 CTGTAGATTTGTTACACACCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:3432987/50‑1 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:3070216/1‑50 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:5092126/1‑49 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 1:251344/50‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA > 1:1410628/1‑50 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 1:3949827/50‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTT < 1:293185/49‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTT < 1:4325232/49‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 1:4293150/50‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 1:4370063/1‑50 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 1:2149421/50‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 1:4833285/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:18205/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:4062842/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:3857101/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:3225031/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:1332665/50‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT > 1:3413587/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT > 1:3230833/1‑49 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:3474173/1‑49 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 1:3508779/49‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC < 1:2994130/50‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA < 1:9747/49‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA < 1:2146624/49‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT > 1:3842595/1‑50 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT > 1:3982281/1‑50 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT < 1:3408515/50‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT < 1:2982476/50‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT < 1:1875587/50‑1 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:1023546/50‑1 TCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT > 1:1150886/1‑49 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 1:3920909/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA > 1:2417801/1‑49 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA > 1:4276781/1‑49 CTATAGCTTTCTTCAGATCTTTATAGCCCACTGATTTAACAACTGGAAAA < 1:4801522/50‑1 ATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:2619467/1‑49 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 1:1189830/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:4949744/1‑48 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT < 1:3403636/48‑1 GCTTTCTTCAGATCTTTATAGCCCGCTTATTTAACAACTTGAAAATAAG < 1:786779/49‑1 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGG > 1:3306198/1‑50 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGG < 1:2353567/50‑1 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT < 1:4295953/50‑1 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 1:455180/1‑50 TTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG > 1:2947742/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:3945466/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT < 1:4245740/49‑1 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG < 1:372104/48‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:965644/1‑50 TTCAGCTCTTTATAGCCCACTTATTTACCAACTTGAAAATAAGGTGTTT > 1:1544549/1‑49 TTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:2082335/1‑49 TTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:3128580/1‑49 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:4613203/49‑1 CAGATCTTTATAGCCCACGTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:1783470/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC > 1:2489960/1‑50 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC > 1:1652500/1‑50 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:4599867/49‑1 TCTTTATAGCCCACTTATTTAACAACTTGCAAATAAGGTGTTTTACCTGG > 1:4464773/1‑50 TCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG > 1:110049/1‑50 tTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG > 1:2576352/2‑50 CTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG > 1:893008/1‑50 TTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:2724613/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG < 1:2303597/47‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG < 1:2705060/46‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG < 1:3294427/45‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG < 1:4087853/45‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG < 1:746498/45‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:2020079/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:4501940/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:635024/39‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:3144017/1‑50 ATAGCCCACTCATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:4898776/1‑50 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:4415110/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT < 1:2728934/49‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:535671/1‑49 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 1:4005710/49‑1 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 1:1997805/49‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA < 1:68222/50‑1 CACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA > 1:4150820/1‑49 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA > NC_000913/2998869‑2998916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |