| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 105 [0] | [0] 107 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 102 (1.040) | 62/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 102 total aligned reads displayed.
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:7407399/1‑49AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:5179811/49‑1AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:6636948/1‑49 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:2010551/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:2327400/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:3388877/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:144375/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:5914380/49‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:2008286/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:5932023/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:3391648/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:4524985/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:5596711/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:2604933/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:5719025/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:276877/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:7310049/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:922913/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:3588191/1‑50 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:3321330/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:643993/1‑50 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:6251097/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:4609032/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:6422129/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:6410637/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:1691937/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:5608899/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:6365559/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 1:5460969/50‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:673886/50‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:5755043/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:6421552/1‑50 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:3911137/1‑49 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:5973142/1‑49 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:5556602/50‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 1:1776612/49‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 1:3173717/49‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT > 1:5571110/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:1420566/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:1943479/1‑49 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:6880368/1‑50 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:441334/49‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:2346760/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:7314306/50‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:121083/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:106366/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:1463739/1‑50 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:424486/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:902347/1‑50 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:5697684/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:326334/1‑50 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:2024914/49‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:2152323/49‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:3769776/1‑49 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:4758867/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:3112342/1‑50 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:2417775/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:832768/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:3719974/1‑50 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:1960129/1‑50 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:6021112/1‑50 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:5720855/1‑50 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:652241/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:7370857/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:6181450/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:1884442/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:2781333/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:1679568/48‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:2983733/48‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:1719747/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:7116263/50‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:6473052/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:6070990/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:1322585/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:5308990/50‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA‑TACATTGTGGT > 1:4478808/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:7421571/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:3196137/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:193462/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:1352921/1‑50 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:7419500/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:276260/1‑50 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:5787595/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:5039796/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:2258137/1‑49 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:4467746/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:7214856/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:5112206/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:1581402/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCACTG < 1:501235/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:4047738/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:5953251/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:4431348/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:5753733/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:4665669/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:4633596/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:4796813/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:2961823/49‑1 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:1251507/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:5127602/1‑50 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |