| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 129 [0] | [0] 128 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 128 (1.310) | 71/98 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 128 total aligned reads displayed.
GCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/508824‑508872‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549617‑549665 GCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG > 1:424896/1‑50GCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG > 1:4397455/1‑50 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG < 1:4589336/50‑1 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG < 1:680414/50‑1 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG < 1:1501410/50‑1 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG < 1:2502479/49‑1 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG > 1:4931722/1‑49 CGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTG < 1:5292182/49‑1 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGA < 1:704514/50‑1 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:4337025/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:2482537/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:1828790/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:5316570/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:143882/1‑49 GTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGG > 1:7172061/1‑49 TCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAA < 1:6253682/50‑1 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACG < 1:2324679/50‑1 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACG > 1:3294753/1‑50 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACG > 1:1163315/1‑50 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAAC < 1:6058608/49‑1 GATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGACGTGGAACG > 1:6772438/1‑50 TGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCG < 1:30277/50‑1 TGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCG > 1:4733666/1‑50 TGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCG > 1:1171465/1‑50 TGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCG < 1:7196961/50‑1 GCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCG > 1:3754429/1‑49 GCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCG > 1:3183623/1‑49 CAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAA < 1:2932381/50‑1 CAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAA > 1:6131060/1‑50 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:6633007/1‑50 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:1656056/1‑50 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:2615540/1‑50 AAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:3721996/1‑50 AAATGCGCCACCCTAAAGCAGCGCAGCCGCAATGATGTGGAACGCGCAAT < 1:5265546/50‑1 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATG < 1:6688468/50‑1 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:5518077/1‑49 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:2111572/1‑49 AATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAAT > 1:1728330/1‑49 ATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGA < 1:5982514/50‑1 TGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGAC < 1:4227947/50‑1 CGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGA < 1:3220107/50‑1 CGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGA > 1:604410/1‑50 CGCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACG < 1:635762/49‑1 GCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGAT > 1:2309140/1‑50 GCCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGAT < 1:7006994/50‑1 CCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATC < 1:5862737/50‑1 CCACCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATC < 1:4256783/50‑1 CCACCCTAAAGCAGCGCATCCCCAATGATGTGGAACGCGCAATGACGATC < 1:4370202/50‑1 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC > 1:5410775/1‑50 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC < 1:6784801/50‑1 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC > 1:462904/1‑50 CCCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATC > 1:1020779/1‑50 CCTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCC < 1:1620606/50‑1 CTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCA > 1:6037122/1‑50 CTAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCA < 1:940848/50‑1 TAAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCAT > 1:7166424/1‑50 AAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC > 1:3919958/1‑50 AAAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC > 1:5577897/1‑50 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC < 1:2620328/50‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC < 1:6110625/50‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCC < 1:1974763/50‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC < 1:4489963/49‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATC < 1:2886115/49‑1 AAGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCAT < 1:3265405/48‑1 AGCAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCT > 1:393413/1‑50 CAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCT < 1:7415531/50‑1 CAGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCT < 1:1533204/50‑1 AGCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTG < 1:5675102/50‑1 GCGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGC < 1:5985379/50‑1 CGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCT < 1:648212/50‑1 CGCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCT > 1:7019993/1‑50 GCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTT > 1:1387684/1‑50 GCATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTT > 1:3071514/1‑50 CATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTG < 1:4376125/50‑1 ATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGC > 1:4367155/1‑50 ATCCGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGC > 1:3762078/1‑50 CGCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG < 1:457198/50‑1 GCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGT < 1:1128914/50‑1 GCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:3561780/1‑49 GCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:621120/1‑49 GCAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:2460988/1‑49 CAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:5619906/1‑48 CAATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAG > 1:6400147/1‑48 AATGATGTGGAACGCGCAATGCCGATCATCCATCCTCTGCTTGCCAGTAG > 1:4275640/1‑50 AATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG > 1:5402610/1‑50 AATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG > 1:5382060/1‑50 AATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG < 1:5223326/50‑1 ATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGT < 1:133575/50‑1 ATGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG > 1:4920872/1‑49 TGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTA < 1:928817/50‑1 TGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG > 1:4420551/1‑48 TGATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAG > 1:4280744/1‑48 GATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAG > 1:4486590/1‑50 GATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAG > 1:1797879/1‑50 ATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGC < 1:2471924/50‑1 ATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGC > 1:4139220/1‑50 ATGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAG < 1:2585440/49‑1 TGTGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCG < 1:4937880/50‑1 TGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > 1:3979637/1‑50 TGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGC < 1:938890/49‑1 GCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/508824‑508872‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549617‑549665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |