| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 129 [0] | [0] 128 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 128 (1.310) | 71/98 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 129 total aligned reads displayed.
TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 | tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:6909335/50‑1 (MQ=255) gCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 1:4397455‑M1/1‑49 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:680414‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:4589336‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 1:4095714‑M1/49‑2 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgga < 1:704514‑M1/50‑4 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:4337025‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:5316570‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:2482537‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:1828790‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:143882‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:7172061‑M1/1‑47 (MQ=255) tCGATGCCAAGTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa < 1:4252108‑M1/50‑5 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa < 1:6253682‑M1/50‑5 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:1163315‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg < 1:2324679‑M1/50‑7 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:6665287‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:6058608‑M1/49‑6 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg < 1:30277‑M1/50‑9 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg < 1:7196961‑M1/50‑9 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg > 1:1171465‑M1/1‑42 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg > 1:4733666‑M1/1‑42 (MQ=255) gCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg > 1:3183623‑M1/1‑41 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc > 1:4789048‑M1/1‑40 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 1:6131060‑M1/1‑39 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa < 1:2932381‑M1/50‑12 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:3721996‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:6633007‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:2615540‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:1656056‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCAGCCGCAATGATGTggaacgcgcaat < 1:5265546‑M1/50‑13 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatg < 1:6688468‑M1/50‑14 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:1728330‑M1/1‑37 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:5518077‑M1/1‑37 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:2111572‑M1/1‑37 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:4227947‑M1/50‑16 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga < 1:3220107‑M1/50‑18 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:635762‑M1/49‑17 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat < 1:5332116‑M1/50‑19 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:2309140‑M1/1‑32 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat < 1:7006994‑M1/50‑19 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:5862737‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:4256783‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCCCAATGATGTggaacgcgcaatgacgatc < 1:4370202‑M1/50‑20 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat > 1:6018973‑M1/1‑29 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc < 1:4522223‑M1/50‑23 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:5410775‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc < 1:6784801‑M1/50‑23 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:1020779‑M1/1‑28 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcc < 1:1620606‑M1/50‑24 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca > 1:6037122‑M1/1‑26 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:940848‑M1/50‑25 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:3437846‑M1/50‑25 (MQ=255) tAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat > 1:4381740‑M1/1‑25 (MQ=255) aaaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc > 1:3919958‑M1/1‑24 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc < 1:6110625‑M1/50‑28 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc < 1:2620328‑M1/50‑28 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:4489963‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:2886115‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat < 1:3265405‑M1/48‑26 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:6371863‑M1/50‑29 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:4349310‑M1/50‑29 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:1533204‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:7415531‑M1/50‑31 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg < 1:5675102‑M1/50‑32 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc < 1:5985379‑M1/50‑33 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:7019993‑M1/1‑17 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct < 1:648212‑M1/50‑34 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt > 1:1387684‑M1/1‑16 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt > 1:5473385‑M1/1‑16 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:6120672‑M1/50‑35 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg > 1:1529467‑M1/1‑15 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:4367155‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:3762078‑M1/1‑14 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:457198‑M1/50‑40 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagt < 1:1128914‑M1/50‑41 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagt < 1:5840112‑M1/50‑41 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:2559975‑M1/1‑10 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:2460988‑M1/1‑10 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:3561780‑M1/1‑10 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:5619906‑M1/1‑9 (MQ=255) aaTGATGTggaacgcgcaatgccgatcatccatcctctgcttgccagtag > 1:4275640‑M1/1‑8 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:5382060‑M1/1‑8 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag < 1:5223326‑M1/50‑43 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:133575‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:7069597‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:4920872‑M1/1‑7 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:928817‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:2048821‑M1/1‑6 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:4420551‑M1/1‑6 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 1:1797879‑M1/1‑5 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 1:2471924‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 1:520792‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc > 1:4139220‑M1/1‑4 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc > 1:3107536‑M1/1‑4 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag < 1:2585440‑M1/49‑46 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg < 1:4937880‑M1/50‑48 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:3759817‑M1/1‑2 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:3979637‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 1:938890‑M1/49‑49 (MQ=255) | TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |