| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 114 [0] | [0] 116 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 114 (1.170) | 65/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 114 total aligned reads displayed.
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:6528523/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:2327401/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:4221945/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA < 1:1474275/50‑1 GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:6636292/50‑1 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC > 1:6067071/1‑50 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCCCCTTTAGAATCC < 1:2979034/50‑1 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCC > 1:5048698/1‑50 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCC < 1:5442571/50‑1 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:2505354/1‑50 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT < 1:7426994/50‑1 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:7324468/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:1840372/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:3823532/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 1:5402521/49‑1 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG < 1:6213709/50‑1 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG < 1:4468863/50‑1 AAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT > 1:4055349/1‑50 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:6926710/50‑1 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT > 1:5951617/1‑50 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:2064427/50‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:4484227/50‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:5169311/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:612409/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:689689/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:1682637/49‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:4891532/50‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:5756994/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:5884585/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:803373/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:1652895/50‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:516670/48‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:2793614/48‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:4642726/48‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:4276109/48‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT > 1:5162686/1‑50 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:5903214/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:2350922/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:6847020/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:1337933/49‑1 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:4033979/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 1:2984016/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 1:6257316/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:4047067/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:6315645/1‑49 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:2340700/49‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:5852433/1‑49 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:3983902/1‑49 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:2460290/1‑50 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:1097572/49‑1 ATCGGTAAACAGCACATTTAGAATCCTGTCGGTTGTTTTCGATTTCAAA < 1:6232164/49‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:703202/50‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:1186555/1‑49 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGTTTTCAAAATA > 1:40754/1‑50 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:62056/1‑50 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:1100831/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:5728705/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:5124858/49‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:6722268/1‑49 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:943569/1‑49 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:1900583/1‑49 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:1071467/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:1234236/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:5634272/1‑50 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:4641234/50‑1 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:1091935/1‑50 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:4120710/1‑50 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:77934/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:6787693/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:2222588/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:2728694/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:2975749/49‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA < 1:2465534/50‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG > 1:283786/1‑49 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA < 1:524546/50‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 1:447727/1‑50 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA < 1:4218133/50‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 1:3823618/1‑50 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:2688058/50‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:420011/50‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:2075125/1‑50 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:6527409/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:6842413/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:4303626/50‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:1817951/50‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:730722/50‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT > 1:7107270/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:6708943/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:533598/48‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:1848093/1‑50 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:6854809/49‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:1795957/49‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:324492/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:6702278/50‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > 1:3561912/1‑50 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:1134243/50‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 1:7238934/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 1:3275169/49‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > 1:3265509/1‑50 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > 1:3421869/1‑50 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |