| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 114 [0] | [0] 116 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 114 (1.170) | 65/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 116 total aligned reads displayed.
GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 | aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa > 1:6528523‑M2/50‑50 (MQ=255)aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa < 1:1474275‑M2/1‑1 (MQ=255)aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa > 1:4221945‑M2/50‑50 (MQ=255) ggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaAt < 1:6636292‑M2/2‑1 (MQ=255) gcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaATc > 1:6067071‑M2/48‑50 (MQ=255) catcagaaaatcgctcatactttaatcggtaaacagcccctttagaATcc < 1:2979034‑M2/4‑1 (MQ=255) catcagaaaatcgctcatactttaatcggtaaacagcacctttagaATcc < 1:5442571‑M2/4‑1 (MQ=255) catcagaaaatcgctcatactttaatcggtaaacagcacctttagaATcc > 1:5048698‑M2/47‑50 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt < 1:7426994‑M2/5‑1 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt > 1:2505354‑M2/46‑50 (MQ=255) cagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGt > 1:7324468‑M2/44‑50 (MQ=255) cagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGt > 1:3509634‑M2/44‑50 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:3823532‑M2/8‑1 (MQ=255) gaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCg < 1:4468863‑M2/9‑1 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt > 1:4055349‑M2/41‑50 (MQ=255) aatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgttt < 1:6926710‑M2/12‑1 (MQ=255) aatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgttt > 1:5951617‑M2/39‑50 (MQ=255) atcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttg < 1:2064427‑M2/13‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt > 1:612409‑M2/35‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:4484227‑M2/16‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt > 1:5169311‑M2/35‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:689689‑M2/15‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgtt < 1:1682637‑M2/15‑1 (MQ=255) ctcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGtttt < 1:4891532‑M2/17‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:516670‑M2/18‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:4276109‑M2/18‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:4642726‑M2/18‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc < 1:2793614‑M2/18‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:803373‑M2/31‑50 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa < 1:1652895‑M2/20‑1 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:5756994‑M2/31‑50 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAt > 1:5162686‑M2/30‑50 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:6847020‑M2/23‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:5903214‑M2/23‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:2350922‑M2/23‑1 (MQ=255) tttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt > 1:4033979‑M2/27‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa < 1:6257316‑M2/25‑1 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa > 1:4047067‑M2/25‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa > 1:6315645‑M2/25‑49 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa < 1:2984016‑M2/25‑1 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa > 1:3983902‑M2/24‑49 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa < 1:2340700‑M2/26‑1 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa > 1:5852433‑M2/24‑49 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:2460290‑M2/23‑50 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:1097572‑M2/27‑1 (MQ=255) atcggtaaacagcacatttagaATCCTGTCGGTTGTTTTCGATTTCaaa < 1:6232164‑M2/27‑1 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:1186555‑M2/22‑49 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAat < 1:703202‑M2/29‑1 (MQ=255) cggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAata > 1:62056‑M2/21‑50 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:1100831‑M2/30‑1 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:5728705‑M2/30‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:6722268‑M2/19‑49 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:943569‑M2/19‑49 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat > 1:1900583‑M2/19‑49 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:717402‑M2/32‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:2456812‑M2/33‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:1071467‑M2/33‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:1234236‑M2/33‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:4641234‑M2/33‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa > 1:5634272‑M2/18‑50 (MQ=255) aaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:1091935‑M2/17‑50 (MQ=255) aaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:4120710‑M2/17‑50 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:2975749‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:2222588‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:2728694‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:77934‑M2/35‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:6787693‑M2/35‑1 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg > 1:283786‑M2/15‑49 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa < 1:1343496‑M2/36‑1 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa < 1:2465534‑M2/36‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:1887778‑M2/37‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 1:524546‑M2/38‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa > 1:447727‑M2/13‑50 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 1:4218133‑M2/38‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 1:6334166‑M2/38‑1 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 1:420011‑M2/39‑1 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:2075125‑M2/12‑50 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:6041596‑M2/11‑49 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:678973‑M2/11‑49 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:4063300‑M2/41‑1 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta < 1:6527409‑M2/41‑1 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 1:2853751‑M2/42‑1 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 1:4303626‑M2/42‑1 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 1:6842413‑M2/42‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 1:1817951‑M2/43‑1 (MQ=255) tttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt > 1:5142859‑M2/7‑50 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:533598‑M2/44‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:6708943‑M2/44‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt > 1:7107270‑M2/5‑50 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt > 1:559647‑M2/5‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt > 1:1848093‑M2/4‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt < 1:1795957‑M2/46‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt > 1:3561912‑M2/3‑50 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt < 1:1134243‑M2/48‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 1:7238934‑M2/47‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 1:3275169‑M2/47‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:3265509‑M2/2‑50 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:3421869‑M2/2‑50 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:748850/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:3845807/1‑49 (MQ=255) | GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |