| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 79 [0] | [0] 77 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 77 (0.790) | 54/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:5021984/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:5212475/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:4171446/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:7193137/1‑50 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:827492/1‑49 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:6671851/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:4532135/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:2127882/1‑50 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:4456168/1‑50 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:6511202/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:6920501/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:7088240/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:6609268/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:1794931/1‑49 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:4682260/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:5777697/1‑50 ATTGGTCCGATCCGGCGCAGCGTCCCAATGGCCTGGATTATTGACCGAAT < 1:4984704/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAg < 1:3732680/50‑2 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:3769456/1‑50 ATTGGTCCGATCCGGCACAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:3839909/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG > 1:5779835/1‑50 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:5228816/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:2382413/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:166507/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:1780760/1‑49 GTCCGATCCGGCGCAACGACCCAATGGCCTGGATTATTGACCGAATGCGG < 1:863407/50‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 1:2224896/1‑50 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 1:3274984/1‑50 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 1:3103203/1‑50 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:3902785/50‑1 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:4504396/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:7099597/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:5254141/50‑1 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:5151758/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:7019950/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:4570438/50‑1 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:4094407/1‑50 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:3286478/1‑49 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:6932141/1‑49 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:781796/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:2350200/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:6441547/1‑49 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA > 1:2792889/1‑50 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA > 1:2667828/1‑50 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:1060671/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:284781/1‑50 AACGTCCCAATTGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:6727830/1‑49 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:4005347/50‑1 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:3330890/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:2910834/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 1:1649927/1‑50 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:364601/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:2674271/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:5325682/50‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:6201479/50‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:144386/50‑1 CCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC > 1:4936939/1‑50 CCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC > 1:1464856/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:3071987/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:4613836/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:4887411/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:946752/1‑49 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:6055060/1‑50 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:3382220/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:7415195/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:3457459/50‑1 GCCTGGATTATTGACCGAATGCGGGCCACATTCACATCATTTCTTACGCG < 1:271942/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 1:4909336/50‑1 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG < 1:6390189/50‑1 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:636415/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG < 1:4060235/50‑1 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:4645865/1‑49 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT > 1:4676561/1‑50 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:6463583/48‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:7383050/50‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:1678835/50‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:6464789/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |