| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 79 [0] | [0] 77 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 77 (0.790) | 54/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236669‑2236765 | taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:7193137‑M2/50‑50 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:5021984‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:4171446‑M2/50‑50 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:5212475‑M2/1‑1 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:6671851‑M2/49‑49 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:827492‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:4532135‑M2/48‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:2127882‑M2/47‑50 (MQ=255) tcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:4456168‑M2/46‑50 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:6511202‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:6920501‑M2/45‑49 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:7088240‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:6609268‑M2/5‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:1794931‑M2/44‑49 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:5777697‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:4682260‑M2/43‑50 (MQ=255) attggtccgatccggcgcagcgtcccaatggcctggattatTGACCGAAt < 1:4984704‑M2/9‑1 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCgaag < 1:3732680‑M2/9‑2 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:3769456‑M2/42‑50 (MQ=255) attggtccgatccggcacaacgtcccaatggcctggattatTGACCGAAt > 1:3839909‑M2/42‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 1:5779835‑M2/41‑50 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 1:5228816‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:166507‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:2382413‑M2/39‑50 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:1780760‑M2/38‑49 (MQ=255) gtccgatccggcgcaacgacccaatggcctggattatTGACCGAATGCgg < 1:863407‑M2/13‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:3902785‑M2/14‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa > 1:3274984‑M2/37‑50 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa > 1:3103203‑M2/37‑50 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa > 1:2224896‑M2/37‑50 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:7099597‑M2/36‑50 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:4504396‑M2/36‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:4094407‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:5151758‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:5254141‑M2/17‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:4570438‑M2/17‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:7019950‑M2/34‑50 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:3286478‑M2/33‑49 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:6932141‑M2/33‑49 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:6441547‑M2/29‑49 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 1:2350200‑M2/22‑1 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 1:781796‑M2/22‑1 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca > 1:2792889‑M2/28‑50 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca > 1:2667828‑M2/26‑50 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat < 1:1060671‑M2/26‑1 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:284781‑M2/25‑50 (MQ=255) aacgtcccaattgcctggattatTGACCGAATGCGGACCACATTCAcat > 1:6727830‑M2/24‑49 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca < 1:4005347‑M2/28‑1 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca < 1:3330890‑M2/28‑1 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:2910834‑M2/29‑1 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 1:1649927‑M2/22‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:2674271‑M2/21‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 1:364601‑M2/30‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:5325682‑M2/31‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:6201479‑M2/31‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:144386‑M2/31‑1 (MQ=255) cccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc > 1:4936939‑M2/19‑50 (MQ=255) cccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc > 1:1464856‑M2/19‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:4613836‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 1:3071987‑M2/33‑1 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCtt < 1:4887411‑M2/34‑1 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:946752‑M2/17‑49 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa > 1:6055060‑M2/16‑50 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:3382220‑M2/35‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:7415195‑M2/36‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:3457459‑M2/37‑1 (MQ=255) gcctggattatTGACCGAATGCGGGCCACATTCACATCATTTCTTAcgcg < 1:271942‑M2/39‑1 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg < 1:4909336‑M2/39‑1 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg < 1:4060235‑M2/41‑1 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:636415‑M2/10‑50 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg < 1:6390189‑M2/41‑1 (MQ=255) tggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:4645865‑M2/9‑49 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGt < 1:6463583‑M2/42‑1 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAt > 1:4676561‑M2/7‑50 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:7383050‑M2/45‑1 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:1678835‑M2/45‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 1:6464789‑M2/48‑1 (MQ=255) | CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236669‑2236765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |