| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 93 [0] | [0] 94 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 90 (0.940) | 62/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:4796415/50‑1CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:6427709/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:4911638/1‑50 AATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:3071635/1‑49 AATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:5515757/1‑49 AATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:6627557/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT > 1:2495077/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT > 1:7193047/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:2397762/49‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC < 1:5768640/48‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:1003652/50‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:6302599/1‑50 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:3295936/50‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:2572477/1‑50 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:2222464/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:5911363/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:3535726/49‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:3729822/49‑1 TTAGCGGCAGCCACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:7052357/1‑49 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:3171314/50‑1 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:6715092/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA > 1:6507601/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA < 1:2971051/49‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:4617911/1‑50 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:5550505/50‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:201229/49‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:3008349/50‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:3667988/50‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:123100/1‑49 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:5781040/1‑49 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:808799/1‑50 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA < 1:6923947/50‑1 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:4409225/1‑50 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:6107360/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:7054986/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:5836676/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:3932295/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:6023989/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:1297472/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:6701599/1‑49 GCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA > 1:1639150/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAA < 1:4711758/50‑1 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAA > 1:6405939/1‑49 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:1118659/50‑1 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:5011956/50‑1 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA > 1:715090/1‑50 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:3301793/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC > 1:7175067/1‑50 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG > 1:7240169/1‑50 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG > 1:1994426/1‑50 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG < 1:3962862/50‑1 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG < 1:1733651/50‑1 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG < 1:5012478/50‑1 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG < 1:6232905/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:4789581/1‑50 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:4104242/1‑50 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:1341712/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:3844338/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA < 1:930029/49‑1 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATC < 1:7276376/50‑1 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:98508/1‑48 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:7478355/1‑48 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:2780690/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG < 1:4095052/49‑1 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC > 1:806157/1‑50 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC > 1:890499/1‑50 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC > 1:921573/1‑50 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC > 1:5472080/1‑50 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC < 1:4805648/50‑1 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC > 1:3935611/1‑50 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC < 1:7155359/50‑1 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG < 1:6296875/50‑1 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG < 1:6938619/50‑1 AATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:928806/1‑50 AATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:3383630/1‑50 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT < 1:90709/49‑1 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA < 1:1844478/50‑1 TCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA > 1:147741/1‑49 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:5978335/1‑50 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTAT < 1:6735642/49‑1 TGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:2500441/1‑50 TGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:134030/1‑50 GGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:4644717/1‑49 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCA < 1:377855/50‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATC < 1:6077191/49‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA < 1:5373693/47‑1 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG < 1:1176949/50‑1 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG > 1:7400613/1‑50 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG > 1:4535665/1‑50 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGT < 1:596156/49‑1 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGT < 1:142742/49‑1 ATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG < 1:5499203/49‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT < 1:1571365/50‑1 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |