| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 96 [0] | [0] 94 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 87 (0.930) | 57/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTCAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:3380939/1‑49TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:3051441/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:4193367/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:2476720/1‑49 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:7149964/1‑50 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:7059405/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:4712763/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:1635964/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1418638/1‑50 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:4987317/1‑49 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1815669/1‑50 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:6017584/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:647186/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5819243/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:4544947/1‑49 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:773652/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:3817975/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:5938277/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:5839789/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:4389040/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:568886/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:5841311/1‑49 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:6796301/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:4300381/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:2390080/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:1994281/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:4346763/50‑1 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:3601661/1‑50 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:5119938/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:5215367/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:5580526/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC < 1:2884515/48‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC < 1:1016003/48‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:5199206/46‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:3646721/46‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:3561611/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:4088893/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:3648486/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:508512/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:3540045/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:1015258/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:5138245/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:1550692/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:3177468/1‑49 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:4021046/1‑50 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:4306378/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:6960146/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:6171290/1‑50 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:4831390/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:5948595/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:4859445/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:5985375/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:4882424/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:5537125/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3251315/1‑50 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:2379179/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:427414/1‑49 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:6506930/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:1812750/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:7350774/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:6005514/1‑49 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:979287/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:5522980/1‑49 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:5192506/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:5594253/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:571633/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:322160/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:5717785/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:1977249/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:526216/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:1961808/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:5606904/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1101971/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:6036387/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:2941947/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:500330/1‑47 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:467915/1‑47 AGGAATTGTATATTGATTATTAGCACTTTATAAGCATTGAATAAAAATAG < 1:5194958/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:6665486/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:5029172/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:2207109/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:3804952/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:7390316/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:1880299/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:5369414/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:6989746/1‑49 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:2677796/1‑50 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:3807214/1‑50 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:161909/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:3383344/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:2317369/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:3831302/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1927711/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:1198637/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:4659257/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:1164414/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:6111167/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:5423543/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |