| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 88 [0] | [0] 87 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 87 (0.890) | 54/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:5390924/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:127983/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT < 1:2100711/50‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC < 1:6325180/49‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC < 1:1940447/49‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:7406155/1‑50 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:4588673/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:6767880/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:6692748/1‑49 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:6311609/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:5420523/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 1:4079106/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:2833557/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:3035188/2‑50 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:4235289/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:7443578/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:2224843/47‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:5885046/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:2158982/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:2900451/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:979530/1‑49 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATc > 1:5733412/1‑49 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:2035428/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:4634451/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:2013996/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:3086825/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:4521040/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:381358/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:5835659/1‑50 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:1503604/1‑49 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:7313774/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTCTAGTCct > 1:21864/1‑48 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:253428/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:1667206/49‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG < 1:6173754/50‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG < 1:4466821/50‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG < 1:2759746/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT > 1:6491572/1‑50 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG > 1:407235/1‑50 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG > 1:6604364/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:1709661/1‑50 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:1080681/1‑50 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:2968446/1‑50 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:279421/1‑50 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGC > 1:6509575/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:2633105/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:2578820/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:288901/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG < 1:4638492/48‑1 GTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT > 1:2100016/1‑50 TGTTGATTTCCAACGAGTATAACTTTGTTTTATAGTCAGGTGGGGCTTTT > 1:7400718/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:2671035/49‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:440833/49‑1 GTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:6779010/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 1:552941/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT < 1:3144905/50‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 1:5111379/49‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 1:7365849/49‑1 TGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:1091647/1‑50 GATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC < 1:2135797/49‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG > 1:5464434/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 1:5904960/50‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 1:5174908/49‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 1:2781185/49‑1 TTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGT > 1:3672293/1‑50 TTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGT > 1:7005001/1‑50 TCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTC < 1:2431463/49‑1 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC > 1:4765998/1‑50 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT > 1:6649629/1‑50 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:6755557/50‑1 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:60184/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT < 1:3691467/50‑1 CGAGTATAACGTTGAGTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT < 1:5097468/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 1:790012/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 1:6619547/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:6627732/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:3134666/1‑50 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:1004728/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:3949874/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > 1:1936241/1‑50 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:433271/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:6177896/50‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG < 1:1739797/50‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG > 1:4819978/1‑50 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 1:5336038/1‑50 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG < 1:6131354/50‑1 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT < 1:4627357/49‑1 TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |