| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,761,993 | Δ8,250 bp | rhsA–yibV | rhsA, yibA, yibJ, yibG, yibS, yibV | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3761993 | 3770242 | 8250 | 117 [0] | [0] 117 | rhsA–yibV | rhsA,yibA,yibJ,yibG,yibS,yibV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 0 (0.000) | 115 (1.200) | 64/96 | 0.0 | 100% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 0 (0.000) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 117 total aligned reads displayed.
ATAATTAGTCCTTACAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGCA > NC_000913/3770194‑3770292 | gacgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggct < 1:6792840‑M2/1‑1 (MQ=255) acgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggct > 1:926130‑M2/49‑49 (MQ=255) acgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggct > 1:3737538‑M2/49‑49 (MQ=255) acgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggct > 1:479303‑M2/49‑49 (MQ=255) gagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCaa < 1:3727799‑M2/4‑1 (MQ=255) gagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCaa > 1:4882094‑M2/47‑50 (MQ=255) gagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCaa > 1:6217464‑M2/47‑50 (MQ=255) agtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAAt > 1:3632827‑M2/46‑50 (MQ=255) agtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAAt < 1:4906573‑M2/5‑1 (MQ=255) agtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAAt < 1:520780‑M2/5‑1 (MQ=255) agtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAAt < 1:5979618‑M2/5‑1 (MQ=255) gtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATg < 1:3821856‑M2/6‑1 (MQ=255) gtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATg < 1:4236270‑M2/6‑1 (MQ=255) tcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGAt < 1:3998888‑M2/8‑1 (MQ=255) catgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATc > 1:5977379‑M2/41‑49 (MQ=255) atgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATcc < 1:4106‑M2/10‑1 (MQ=255) atgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATcc > 1:6971346‑M2/40‑49 (MQ=255) tgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCaa < 1:7049733‑M2/12‑1 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCaaa > 1:2147091‑M2/37‑49 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCaaa > 1:5995650‑M2/37‑49 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAAt < 1:6225895‑M2/14‑1 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATACaaa < 1:1307465‑M2/13‑1 (MQ=255) cgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAAt > 1:6256409‑M2/36‑49 (MQ=255) gagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATaa < 1:6815182‑M2/16‑1 (MQ=255) gagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATaa < 1:1673962‑M2/16‑1 (MQ=255) agtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 1:3750126‑M2/34‑48 (MQ=255) gtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAg < 1:6364522‑M2/18‑1 (MQ=255) gtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAg < 1:2430095‑M2/18‑1 (MQ=255) tcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 1:4769265‑M2/32‑46 (MQ=255) tcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 1:475307‑M2/32‑46 (MQ=255) tcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGa < 1:2512351‑M2/19‑1 (MQ=255) cctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGa > 1:3085040‑M2/31‑49 (MQ=255) ctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGAt > 1:7283418‑M2/30‑49 (MQ=255) ctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGAt < 1:222547‑M2/20‑1 (MQ=255) ctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATa < 1:6961691‑M2/21‑1 (MQ=255) ttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt > 1:1151528‑M2/28‑50 (MQ=255) ttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt > 1:1805946‑M2/28‑50 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATaa < 1:6100198‑M2/22‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATaa < 1:3237360‑M2/22‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt < 1:3509341‑M2/23‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt < 1:7088509‑M2/23‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt < 1:4443871‑M2/23‑1 (MQ=255) gtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATg > 1:2533235‑M2/26‑49 (MQ=255) tgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCa < 1:288594‑M2/26‑1 (MQ=255) tgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCa < 1:3480895‑M2/26‑1 (MQ=255) tgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCa > 1:5860306‑M2/25‑50 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCAt < 1:4621956‑M2/27‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCAt < 1:3512560‑M2/27‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCAt < 1:6855591‑M2/27‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc < 1:2938780‑M2/28‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc > 1:6455548‑M2/23‑50 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc < 1:6732092‑M2/28‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc > 1:6845187‑M2/23‑50 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc < 1:1356804‑M2/28‑1 (MQ=255) gaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATcc < 1:1432166‑M2/29‑1 (MQ=255) gaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATcc < 1:4979230‑M2/29‑1 (MQ=255) gaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc > 1:5836094‑M2/22‑49 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc > 1:3263693‑M2/21‑48 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCa < 1:4662206‑M2/30‑1 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCa < 1:3684199‑M2/30‑1 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg < 1:3337261‑M2/31‑1 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg > 1:783155‑M2/20‑50 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg < 1:1945036‑M2/31‑1 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg < 1:6317455‑M2/31‑1 (MQ=255) gaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGc > 1:6471440‑M2/19‑50 (MQ=255) gaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGc < 1:3734480‑M2/32‑1 (MQ=255) aaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCt > 1:2721667‑M2/18‑50 (MQ=255) aaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCt < 1:871160‑M2/33‑1 (MQ=255) aaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCt < 1:6885586‑M2/33‑1 (MQ=255) aaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTgg < 1:5564696‑M2/35‑1 (MQ=255) aaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTgg > 1:606976‑M2/16‑50 (MQ=255) aatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGt > 1:5556105‑M2/15‑50 (MQ=255) atatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTc < 1:924267‑M2/37‑1 (MQ=255) atatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTc < 1:1597913‑M2/37‑1 (MQ=255) atatcagtatggcTCAATGATCCAAATAAAGATAAGGCATCCAGCTGGTc < 1:6845291‑M2/37‑1 (MQ=255) tatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCa > 1:4541283‑M2/13‑50 (MQ=255) tcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAtt < 1:3147211‑M2/40‑1 (MQ=255) tcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAt < 1:2218969‑M2/39‑1 (MQ=255) tcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAt < 1:1457855‑M2/39‑1 (MQ=255) cagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTc > 1:2586725‑M2/10‑50 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:3771214‑M2/9‑50 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:5202602‑M2/9‑50 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt < 1:6242477‑M2/42‑1 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCtt < 1:1580619‑M2/43‑1 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCtt < 1:4768396‑M2/43‑1 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCtt < 1:5045426‑M2/43‑1 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:7057501‑M2/8‑49 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:2366382‑M2/8‑49 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:4510045‑M2/8‑49 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:2239964‑M2/8‑49 (MQ=255) tatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTa < 1:5765537‑M2/44‑1 (MQ=255) tatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTa < 1:6409345‑M2/44‑1 (MQ=255) tggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagc < 1:5123666‑M2/46‑1 (MQ=255) tggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagc < 1:7434576‑M2/46‑1 (MQ=255) tggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagc < 1:5637581‑M2/46‑1 (MQ=255) tggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTag < 1:3638083‑M2/45‑1 (MQ=255) tggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTag > 1:2644187‑M2/5‑49 (MQ=255) gcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagcag < 1:100403‑M2/48‑1 (MQ=255) gcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagcag < 1:1618935‑M2/48‑1 (MQ=255) cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagcagc < 1:5229765‑M2/49‑1 (MQ=255) | ATAATTAGTCCTTACAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGCA > NC_000913/3770194‑3770292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |