New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3386201218 (1.090)24 (0.130) 18/176 13.8 11.3% intergenic (‑72/+20) yhcO/aaeB putative barnase inhibitor/p‑hydroxybenzoic acid efflux system component
?NC_000913 = 3386206 183 (1.030)intergenic (‑77/+15) yhcO/aaeB putative barnase inhibitor/p‑hydroxybenzoic acid efflux system component
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 208 total aligned reads displayed.

AAATCAAAGGTATAAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGC  >  NC_000913/3386107‑3386305
                                                                                                   |                                                                                                   
 aatcaaaGGTATAAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTgg                                                                                                    <  1:3514628/100‑1 (MQ=255)
 aatcaaaGGTATAAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTgg                                                                                                    <  1:3186583/100‑1 (MQ=255)
     aaaGGTATAAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTc                                                                                                >  1:483819/1‑100 (MQ=255)
         gTATAAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGtt                                                                                            <  2:919914/100‑1 (MQ=255)
          nataAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGttt                                                                                           >  1:4298072/2‑100 (MQ=255)
           ataAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGtttt                                                                                          >  2:1661708/1‑100 (MQ=255)
           ataAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGtttt                                                                                          <  2:2781646/100‑1 (MQ=255)
            taAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTg                                                                                         >  2:3958249/1‑100 (MQ=255)
            taAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTg                                                                                         <  1:3843570/100‑1 (MQ=255)
              aaTATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGAc                                                                                       <  2:4800477/100‑1 (MQ=255)
              aaTATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGAc                                                                                       >  1:3983340/1‑100 (MQ=255)
              aaTATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGAc                                                                                       <  1:1939946/100‑1 (MQ=255)
              aaTATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGAc                                                                                       <  2:709548/100‑1 (MQ=255)
               atatTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACt                                                                                      <  1:1146245/100‑1 (MQ=255)
               atatTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACt                                                                                      <  1:4044809/100‑1 (MQ=255)
                tatTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTCTAGCCATGAAAAAACCGCCGCTTTTGGCGCCGGTTTTGACtt                                                                                     >  1:3262279/1‑100 (MQ=255)
                tatTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACtt                                                                                     <  1:4706081/100‑1 (MQ=255)
                 atTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTa                                                                                    >  1:2417373/1‑100 (MQ=255)
                 atTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTa                                                                                    <  1:3429222/100‑1 (MQ=255)
                       cTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATATTCATGTAAAAACCTACGCTTTTGGCTTCTGTGTTGACTTAACTATc                                                                              >  2:1206490/1‑100 (MQ=255)
                       cTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATc                                                                              <  1:1511785/100‑1 (MQ=255)
                         gTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCgg                                                                            <  1:4193382/100‑1 (MQ=255)
                         gTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCgg                                                                            >  2:2004302/1‑100 (MQ=255)
                         gTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCgg                                                                            <  1:1657943/100‑1 (MQ=255)
                         gTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCgg                                                                            <  1:1715057/100‑1 (MQ=255)
                           tGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTc                                                                          <  2:2502202/100‑1 (MQ=255)
                            gCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCa                                                                         >  1:3099940/1‑100 (MQ=255)
                            gCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCa                                                                         >  2:1727028/1‑100 (MQ=255)
                              cACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAAc                                                                       >  1:261387/1‑100 (MQ=255)
                              cACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAAc                                                                       <  1:4776457/100‑1 (MQ=255)
                              cACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAAc                                                                       <  1:3924194/100‑1 (MQ=255)
                              cACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAAc                                                                       <  2:2657893/100‑1 (MQ=255)
                               aCCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACg                                                                      <  1:2350114/100‑1 (MQ=255)
                               aCCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACg                                                                      <  1:867916/100‑1 (MQ=255)
                               aCCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACg                                                                      <  2:3845080/100‑1 (MQ=255)
                                ccGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGc                                                                     <  2:2206855/100‑1 (MQ=255)
                                 cGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCa                                                                    <  2:2892062/100‑1 (MQ=255)
                                  gTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAACACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCAt                                                                   >  1:4339014/1‑100 (MQ=255)
                                   tCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTTGCGTCGGTTTTGACTTAACTATCGGTCAACGCATg                                                                  <  2:143033/100‑1 (MQ=255)
                                   tCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATg                                                                  <  1:4503346/100‑1 (MQ=255)
                                   tCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATg                                                                  <  2:4718253/100‑1 (MQ=255)
                                    cACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGt                                                                 <  2:3882186/100‑1 (MQ=255)
                                       gTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGa                                                              <  2:4740842/100‑1 (MQ=255)
                                        tttCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGAt                                                             <  1:540908/100‑1 (MQ=255)
                                         ttCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATa                                                            >  1:1086749/1‑100 (MQ=255)
                                           cgcgGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACt                                                          <  1:3805904/100‑1 (MQ=255)
                                           cgcgGCGAGGTCTGCCGTGCATCGCTAAGTATAGCCATTAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACCCATGTTCATACt                                                          <  2:4885361/100‑1 (MQ=255)
                                            gcggcgAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACtt                                                         >  2:4946795/1‑100 (MQ=255)
                                            gcggcgAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACtt                                                         <  2:3320816/100‑1 (MQ=255)
                                              ggcgAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTAt                                                       >  1:362001/1‑100 (MQ=255)
                                                 gAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGa                                                    <  2:4423639/100‑1 (MQ=255)
                                                   gTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGc                                                  >  1:11590/1‑100 (MQ=255)
                                                   gTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGc                                                  >  2:5056296/1‑100 (MQ=255)
                                                   gTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGc                                                  >  1:2545821/1‑100 (MQ=255)
                                                   gTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGc                                                  >  2:1539349/1‑100 (MQ=255)
                                                     tCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCAt                                                >  2:440497/1‑100 (MQ=255)
                                                      cTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGATCAACGCATGTTGATACTTATGGAGCATc                                               >  2:1511901/1‑100 (MQ=255)
                                                        gCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATccc                                             >  1:3128216/1‑100 (MQ=255)
                                                        gCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATccc                                             >  1:4057546/1‑100 (MQ=255)
                                                         ccGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATcccc                                            <  1:74469/100‑1 (MQ=255)
                                                          cGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCg                                           <  2:2968817/100‑1 (MQ=255)
                                                          cGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCg                                           >  2:269211/1‑100 (MQ=255)
                                                            tGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGcc                                         <  1:642446/100‑1 (MQ=255)
                                                               agcGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGc                                      <  2:4017328/98‑1 (MQ=255)
                                                               aTCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGc                                      >  1:4568113/1‑100 (MQ=255)
                                                                tCGCTAAGTATAGCCATGAAAAACCCGACGCTTTTGGCTTCGGTTTTGACTTAACTCTCGGTCCACGCATGTTGATACTTATGTACCATCCCCGCCAGcc                                     <  2:2335779/100‑1 (MQ=255)
                                                                  gCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGa                                   >  2:4600506/1‑100 (MQ=255)
                                                                  gCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGa                                   >  1:1636882/1‑100 (MQ=255)
                                                                  gCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGa                                   >  1:3328942/1‑100 (MQ=255)
                                                                  gCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGa                                   >  2:4249416/1‑100 (MQ=255)
                                                                   cTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGAt                                  >  1:3665387/1‑100 (MQ=255)
                                                                    tAAGTATAGCCATGAAATAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGAtt                                 <  1:493776/100‑1 (MQ=255)
                                                                         ataGCCATGAAAAAACTGGCTCTTTTGGCGTCGGTGTTGAGTTAACTATCGGTAAATGTATGTTGGTACTGAGGGACCATGCCCGCGAGCCGATTTACCg                            >  2:740792/1‑100 (MQ=255)
                                                                          taGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCgg                           <  2:1459725/100‑1 (MQ=255)
                                                                             ccATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTc                        <  2:11475/100‑1 (MQ=255)
                                                                             ccATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGCAGCATCCCCGCCAGCCGATTTACCGGTTc                        <  2:1445892/100‑1 (MQ=255)
                                                                              cATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTcc                       >  1:1759111/1‑100 (MQ=255)
                                                                               aTGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCg                      >  1:3347119/1‑100 (MQ=255)
                                                                                 gAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTc                    >  2:1072387/1‑100 (MQ=255)
                                                                                 gAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTc                    >  2:3454455/1‑100 (MQ=255)
                                                                                  aaaaaaCCGACGCTTTTGGCGTCGGTTTTGCCTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCa                   <  1:5025240/100‑1 (MQ=255)
                                                                                   aaaatCCGACGCTTTTGGCGTCGGTTTTGACTTAACTAGCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCAc                  <  2:558643/100‑1 (MQ=255)
                                                                                   aaaaaCCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCAc                  >  2:3412293/1‑100 (MQ=255)
                                                                                    aaaaCCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCAcc                 >  2:3389315/1‑100 (MQ=255)
                                                                                    aaaaCCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCAcc                 >  1:1047207/1‑100 (MQ=255)
                                                                                      aaCCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTg               >  1:358117/1‑100 (MQ=255)
                                                                                        ccGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCg             >  2:1857734/1‑100 (MQ=255)
                                                                                        ccGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCg             >  1:1551700/1‑100 (MQ=255)
                                                                                         cGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCgg            >  1:2849306/1‑100 (MQ=255)
                                                                                         cGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCgg            >  1:3876012/1‑100 (MQ=255)
                                                                                         cGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCgg            >  1:4144176/1‑100 (MQ=255)
                                                                                          gACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGt           <  1:1455841/100‑1 (MQ=255)
                                                                                          gACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGt           <  1:1055636/100‑1 (MQ=255)
                                                                                          gACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGAATCCCCGCCAGACGATTTACGGCTTCCGTCACCTGCGGt           >  2:4809795/1‑100 (MQ=255)
                                                                                             gCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGgc        <  1:3019149/100‑1 (MQ=255)
                                                                                             gCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGgc        >  2:4133564/1‑100 (MQ=255)
                                                                                             gCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGgc        <  2:1416933/100‑1 (MQ=255)
                                                                                              cTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGgcg       >  1:3116206/1‑100 (MQ=255)
                                                                                                   ggcggcGGTTTTGACTTACCTATCGGTCAACGCAGGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGc  <  2:3519293/100‑1 (MQ=255)
                                                                                                   ggCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGc  >  1:4270518/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAATCAAAGGTATAAATATTCATCTGTTGCCACCGTCACGTTTCGCGGCGAGTTCTGCCGTGCATCGCTAAGTATAGCCATGAAAAAACCGACGCTTTTGGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGC  >  NC_000913/3386107‑3386305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.