| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3670238 | 122 (1.200) | 10 (0.100) | 8/384 | NT | 7.6% | coding (647/1650 nt) | treF | cytoplasmic trehalase |
| ? | NC_000913 | = 3670407 | 124 (1.250) | coding (816/1650 nt) | treF | cytoplasmic trehalase | |||||
GACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3669997‑3670238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcacAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGGCGAAGTTATCGGCCATGCAT < NC_000913/3670407‑3670173 GACCAGCTGTGGCCGGTTCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCG < 1:1077704/239‑1GACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCG < 1:497806/239‑1GACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCG < 1:659407/239‑1GACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCG < 1:718311/239‑1 AGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGC < 2:609127/236‑1 AGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGC > 1:609127/1‑236 CGAACCACAGGATCTCATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGC < 2:95782/214‑1 CGAACCACAGGATCTCATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGC > 1:95782/1‑214 ATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTC < 1:269442/209‑1 ATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCCGTCCGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTC > 2:269442/1‑209 ATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAAC < 2:862078/158‑1 ATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAAC > 1:862078/1‑158 ACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACC > 1:868346/1‑239 ATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCA > 1:356031/1‑238 TGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGC > 1:893493/1‑239 AAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCT < 2:356031/238‑1 AAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCT < 2:868346/238‑1 AAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCT < 2:893493/238‑1 GATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATT > 2:333945/1‑139 GATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCATCCGCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATT < 1:333945/139‑1 GCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGGCGAAGTTATCGGCCATGCAT < 1:677132/239‑1 GCACAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGGCGAAGTTATCGGCCATGCAT < 2:354936/239‑1 GCACAACATGGCGATAGGACTGATTAGGGATTAACGATTCCGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGGCGAAGTTATCGGCCATGCAT < 1:252648/239‑1 GACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCC‑AACGGCAACCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3669997‑3670238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcacAACATGGCGATAGGCCTGATTAGGGATTAACGATTCTGCACCGTCCATCCAGAAGGCATATTCCATTTTAAGGTGGTCGAGATAGCGGCGCGCACCGCGTACACCATCTTCTTCAAACAACTCCACCATCAGCGCAAAAACCGGTGGTTGCGAGCGGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGGCGAAGTTATCGGCCATGCAT < NC_000913/3670407‑3670173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |