New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225685288 (1.310)74 (0.360) 32/186 13.6 21.5% intergenic (+110/‑74) alaV/rrlH tRNA‑Ala/23S ribosomal RNA of rrnH operon
?NC_000913 = 3943636 NA (NA)intergenic (+126/‑68) gltU/rrlC tRNA‑Glu/23S ribosomal RNA of rrnC operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 127 total aligned reads displayed.

GTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225581‑225685
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacaaCTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  NC_000913/3943636‑3943538
                                                                                                                                                                                                                
GTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑G                                                                                                          <  1:4821498/100‑1
     GGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGTATCAAGCTGAATATTGAAACACT‑‑‑GAACAA                                                                                                     >  2:3345812/1‑100
     GGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAA                                                                                                     >  1:4974850/1‑100
     GGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAA                                                                                                     <  1:1580812/100‑1
     GGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCAAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGACAATTGAAACACT‑‑‑AAACAA                                                                                                     >  2:4720491/1‑100
      tTTAAATAAAAAATACTTCAGAGTGTACCTTCAAATGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGTTCAAGCTGAAAATTGAAACACT‑‑‑GAACAAC                                                                                                    <  2:3302272/99‑1
        TAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAAGCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAAgga                                                                                                  >  1:5082157/1‑97
         AAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTT                                                                                                 >  2:1852377/1‑100
            TAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGT                                                                                              <  2:3766539/100‑1
                 AATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTC                                                                                         <  1:105121/100‑1
                 AATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTC                                                                                         <  2:3182215/100‑1
                   TACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAG                                                                                       <  2:2461222/100‑1
                   TACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAG                                                                                       <  2:2191129/100‑1
                   TACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAG                                                                                       <  1:646227/100‑1
                   TACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAG                                                                                       <  1:2570575/100‑1
                    ACTTCAGAGTGTACCTGCGAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACC‑‑‑GAACAACTTTCGTTGTTCAGT                                                                                      <  2:1382874/100‑1
                    ACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGT                                                                                      <  2:2015242/100‑1
                    ACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGT                                                                                      <  2:2013806/100‑1
                    ACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGT                                                                                      <  2:3284120/100‑1
                    ACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCATTGTTCAGn                                                                                      <  1:2618841/100‑2
                    ACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATATAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGT                                                                                      <  2:2702039/100‑1
                    ACTTCAGAGTGTACCTGCAAAGGTTCACAGCGAAATTAAGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGT                                                                                      <  1:1515220/100‑1
                     CTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTG                                                                                     <  2:5000633/100‑1
                     CTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTG                                                                                     <  2:2245171/100‑1
                     CTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCATTGTTCAGTG                                                                                     <  1:1058690/100‑1
                     CTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCATTGTTCAGTG                                                                                     <  2:5290842/100‑1
                     CTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACC‑‑‑GAACAACTTTCGTTGTTCAGTG                                                                                     <  2:3015669/100‑1
                      TTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGT                                                                                    <  1:3174333/100‑1
                      TTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGATGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGT                                                                                    >  1:5307680/1‑100
                      TTCAGAGTGTAACTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACGTTCGGTGTTCAGTGT                                                                                    <  2:3215006/100‑1
                       TCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCATTGTTCAGTGTT                                                                                   <  1:1830304/100‑1
                       TCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACC‑‑‑GAACAACTTTCGTTGTTCAGTGTT                                                                                   <  1:235056/100‑1
                         AGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTC                                                                                 <  1:3587141/100‑1
                         AGAGTGTACCTGCAAAGGTTAACTGCGAAGTTTTGCTCTTTAAAAATCTGAAACAAGATGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTC                                                                                 <  2:474606/100‑1
                          GAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCA                                                                                <  1:3901678/100‑1
                          GAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCA                                                                                <  1:3250757/100‑1
                          GAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCATTGTTCAGTGTTTCA                                                                                <  2:1846374/100‑1
                          GAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCATTGTTCAGTGTTTCA                                                                                <  1:3306981/100‑1
                           AGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACAC‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAAT                                                                              <  2:604850/100‑1
                                   TGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACAC‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCT                                                                      <  2:4089054/100‑1
                                   TGCAAAGGTTCACTGCGAAGTTATGATATTAAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGC                                                                       <  2:2369369/100‑1
                                         GGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATC                                                                 >  2:1781764/1‑100
                                          GTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTG                                                                    <  2:4078820/100‑1
                                          GTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCC                                                                <  1:176755/100‑1
                                                TGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACAC‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTT                                                         <  1:4070552/100‑1
                                                  CGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTT                                                        <  2:3357829/100‑1
                                                  CGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCGTGTTTCAATTTTCAGCTTGATCCAGATTTTTA                                                       >  1:1030485/1‑100
                                                      taTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAG                                                    <  2:4463181/98‑1
                                                         TTGCGCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGC                                                 >  2:1518178/1‑100
                                                          TGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCA                                                <  1:701041/100‑1
                                                          TGCTATTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑CAAGCACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTCGATCCAGATTTTTACAGAGCA                                                <  2:5235663/100‑1
                                                             TCTTTAAAAATCTGGATCACGCTGAAAATTGAAACACT‑‑‑TAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAT                                             <  1:4675555/100‑1
                                                                TTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATC                                          <  1:3689667/100‑1
                                                                  AAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTC                                        >  2:4465683/1‑100
                                                                          GGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACGAGAGTTGTTCAGTGTTTCAATTTTCAGCTTTATCCAGATTTTTAAAGAGCAAATATCTCAAACATCA                                >  2:2654630/1‑100
                                                                           GATCAAGCTGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACC                              >  1:2998843/1‑100
                                                                                AGCTGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCGGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAA                          >  1:2561409/1‑100
                                                                                AGCTGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAA                          >  2:2586348/1‑100
                                                                                   TGAAAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATG                      <  2:2970769/100‑1
                                                                                    aAAAATTGAAACACT‑‑‑GACCAAATTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATG                      <  1:1979786/99‑1
                                                                                      AAATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAG                    >  1:2974757/1‑100
                                                                                        ATTGAAACACT‑‑‑GAACAACGAAAGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTT                  >  2:2246006/1‑100
                                                                                          tctAAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTT                 <  1:5047771/97‑1
                                                                                          TTGAAACACT‑‑‑GAGCAACTCTCGCTGAGCAGTGTTTCAATTTTCAGCTTGGTCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTT                 <  1:3496277/100‑1
                                                                                           TGAAACACT‑‑‑GAACAACGAGAGTTGTTCGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTG               >  1:1077808/1‑100
                                                                                             AAACACT‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTaga              >  2:4977768/1‑97
                                                                                              AACACC‑‑‑GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAG             >  2:751607/1‑100
                                                                                                       GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTA       >  2:3150313/1‑100
                                                                                                       GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTA       <  1:190800/100‑1
                                                                                                       GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTA       <  2:4042457/100‑1
                                                                                                       GAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTA       >  2:3450843/1‑100
                                                                                                        AACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAA      <  1:5437274/100‑1
                                                                                                        AACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAA      <  1:1916606/100‑1
                                                                                                        AACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAA      >  1:1953298/1‑100
                                                                                                        AACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAA      >  1:2266438/1‑100
                                                                                                        AACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAA      <  2:3584926/100‑1
                                                                                                        AACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAA      >  1:3806379/1‑100
                                                                                                         ACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAG     <  1:1190956/100‑1
                                                                                                         ACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAG     <  2:673266/100‑1
                                                                                                         ACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAG     <  1:3179734/100‑1
                                                                                                         ACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAG     <  2:4031165/100‑1
                                                                                                         ACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAG     >  2:3809167/1‑100
                                                                                                          CAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGG    >  1:937603/1‑100
                                                                                                          CAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGG    >  1:1352997/1‑100
                                                                                                          CAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGG    <  1:1798905/100‑1
                                                                                                          CAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGG    >  1:2984862/1‑100
                                                                                                          CAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGG    <  1:298282/100‑1
                                                                                                          CAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGAAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGG    <  2:2087468/100‑1
                                                                                                           AACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGC   >  1:5146976/1‑100
                                                                                                           AACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGC   <  2:3221795/100‑1
                                                                                                           AACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGC   <  2:4831260/100‑1
                                                                                                           AACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGC   >  2:4044441/1‑100
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  2:4762528/100‑1
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  1:2198704/100‑1
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  >  1:5009289/1‑100
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  1:885520/100‑1
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  1:4663843/100‑1
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  >  1:1285476/1‑100
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  1:4361973/100‑1
                                                                                                            ACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  2:3735036/100‑1
                                                                                                                                                                                                                
GTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACT‑‑‑GAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225581‑225685
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacaaCTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCGAAGATGAGTTTTGAGATATTAAGGCA  <  NC_000913/3943636‑3943538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.