BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 225685	288 (1.310)	74 (0.360)	32/186	13.6	21.5%	intergenic (+110/‑74)	alaV/rrlH	tRNA‑Ala/23S ribosomal RNA of rrnH operon
*	?	NC_000913	= 3943636	NA (NA)	74 (0.360)	32/186	13.6	21.5%	intergenic (+126/‑68)	gltU/rrlC	tRNA‑Glu/23S ribosomal RNA of rrnC operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 294 total aligned reads displayed.

GGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG  >  NC_000913/225586‑225784

ggTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACaa                                                                                                     >  1:2982237/1‑100 (MQ=32)

ggTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACaa                                                                                                     <  1:1580812/100‑1 (MQ=32)

 gTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAAt                                                                                                    <  1:1186755/100‑1 (MQ=32)

 gTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAAt                                                                                                    >  2:3216922/1‑100 (MQ=32)

  ttAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATg                                                                                                   >  1:3976938/1‑100 (MQ=32)

   taaataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTTGATCAAGCTGAAAATTGAAACACTGAACAATGa                                                                                                  >  1:581395/1‑100 (MQ=18)

    aaataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGaa                                                                                                 <  2:2239756/100‑1 (MQ=33)

     aataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGaaa                                                                                                <  2:5676/100‑1 (MQ=33)

     aataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGaaa                                                                                                >  2:547142/1‑100 (MQ=33)

      ataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAg                                                                                               >  1:4331066/1‑100 (MQ=34)

       taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAgt                                                                                              >  2:2896133/1‑100 (MQ=33)

         aaaaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAgttg                                                                                            >  2:36206/1‑100 (MQ=34)

          aaaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAgttgt                                                                                           >  2:1119880/1‑100 (MQ=34)

          aaaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATAGAAACACTGAACAATGAAAgttgt                                                                                           >  2:1957236/1‑100 (MQ=21)

           aaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAgttgtt                                                                                          >  2:3544588/1‑100 (MQ=34)

               aCTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTg                                                                                      <  1:2262865/100‑1 (MQ=34)

                cTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGa                                                                                     >  1:3230468/1‑100 (MQ=34)

                 ttaagagTGTACCTGCAAAGGTTCACTACAAAGTTCCGCTCTTTAAAAACCTGAAACAAGCAAAAAATTGAAACACTGAACAATGACCGTTGTTCGTCAg                                                                                    <  2:796236/97‑1 (MQ=2)

                 ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAg                                                                                    <  2:728668/100‑1 (MQ=34)

                 ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAg                                                                                    <  1:72578/100‑1 (MQ=34)

                 ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAg                                                                                    <  1:4539305/100‑1 (MQ=34)

                 ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAg                                                                                    <  2:2259203/100‑1 (MQ=33)

                 ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAg                                                                                    <  2:4458189/100‑1 (MQ=33)

                 ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAg                                                                                    <  1:2250973/100‑1 (MQ=34)

                   cAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGtc                                                                                  <  2:136/100‑1 (MQ=33)

                   cAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGtc                                                                                  >  2:4380059/1‑100 (MQ=34)

                     gagTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGtctc                                                                                >  2:3957735/1‑100 (MQ=34)

                       gtgtACCTGCTAAGGTTCACTGCGAAGTTTTGCTGTTTAAAAATCTGGATCAATCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGtctctc                                                                              >  2:5070868/1‑100 (MQ=255)

                       gtgtACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGtctctc                                                                              >  2:2084696/1‑100 (MQ=34)

                         gtACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCaa                                                                            <  2:541158/100‑1 (MQ=34)

                            ccTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTAAAAtt                                                                         <  2:93198/100‑1 (MQ=21)

                             cTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAAttt                                                                        >  1:90456/1‑100 (MQ=34)

                               gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTc                                                                      >  2:2533379/1‑100 (MQ=34)

                               gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTGCGTGAGTCGCTCAAAttagc                                                                      >  2:46850/1‑97 (MQ=255)

                                cAAAGGTTCGCTGCGAAGTTTTGCTCGTTAAAAATCTGGGGCGAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCg                                                                     <  1:5290395/100‑1 (MQ=11)

                                cAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCg                                                                     <  2:2738086/100‑1 (MQ=33)

                                cAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCg                                                                     <  2:2880380/100‑1 (MQ=34)

                                  aaGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCa                                                                   >  2:4241544/1‑100 (MQ=34)

                                  aaGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCa                                                                   <  1:650179/100‑1 (MQ=34)

                                  aaGGTTCACCGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGCTCGTGAGTCCCCCAAATTTTCGCa                                                                   >  2:2785852/1‑100 (MQ=11)

                                      ttCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAacac                                                               <  1:4116798/100‑1 (MQ=34)

                                         aCTGCGAAGTTTTGCTCTTTACAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgat                                                            >  1:1298508/1‑100 (MQ=21)

                                         aCTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgat                                                            <  1:2441813/100‑1 (MQ=34)

                                          cTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg                                                           >  2:1783504/1‑100 (MQ=34)

                                            gCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                         <  1:4398378/100‑1 (MQ=34)

                                            gCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                         >  1:2769081/1‑100 (MQ=34)

                                              gAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATgg                                                       >  2:1601928/1‑100 (MQ=35)

                                               aaGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGa                                                      >  1:2644269/1‑100 (MQ=37)

                                               aaGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGa                                                      >  1:4637168/1‑100 (MQ=37)

                                                 gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATc                                                    >  1:2141095/1‑100 (MQ=39)

                                                 gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATc                                                    <  2:791367/100‑1 (MQ=38)

                                                 gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATc                                                    >  2:3564468/1‑100 (MQ=39)

                                                 gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATc                                                    >  1:4936308/1‑100 (MQ=39)

                                                 gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATc                                                    <  2:4306358/100‑1 (MQ=38)

                                                  ttttGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCg                                                   <  2:657704/100‑1 (MQ=38)

                                                    ttGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCa                                                 <  2:3720053/100‑1 (MQ=255)

                                                    ttGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCa                                                 <  1:801416/100‑1 (MQ=255)

                                                     tGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCaa                                                >  1:3140579/1‑100 (MQ=255)

                                                     tGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCaa                                                >  1:3527758/1‑100 (MQ=255)

                                                       ctctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGa                                              <  1:4227840/100‑1 (MQ=255)

                                                       ctctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGa                                              <  1:1708217/100‑1 (MQ=255)

                                                        tctTTAAGAATGTCGATCGAGCGGAGAATTGAAACACTGAACAGTGAAAGTTGTTCGTGAGGCTCTCAAATCTTCGCAACACGAGGATGGATCGCAAGaa                                             <  2:3292778/100‑1 (MQ=14)

                                                        tctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGaa                                             <  1:3893374/100‑1 (MQ=255)

                                                         ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGaaa                                            >  2:1179966/1‑100 (MQ=255)

                                                         ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGaaa                                            >  2:2460439/1‑100 (MQ=255)

                                                          tttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAAc                                           <  1:1009367/100‑1 (MQ=255)

                                                           ttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCaacaaaca                                          >  2:1446368/1‑100 (MQ=255)

                                                           ttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACa                                          >  2:1736126/1‑100 (MQ=255)

                                                           ttAAAAATCTGGATCAAGCTGAAAAATGAAACACTGAACAATGAAAGATGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGGAACa                                          >  1:4987171/1‑100 (MQ=255)

                                                             aaaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATc                                        <  2:3607122/100‑1 (MQ=255)

                                                                aaTCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTc                                     >  1:4283663/1‑100 (MQ=255)

                                                                 aTCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCg                                    >  2:4883849/1‑100 (MQ=255)

                                                                  tCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCgg                                   <  1:553596/100‑1 (MQ=255)

                                                                    tGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGt                                 >  1:5324022/1‑100 (MQ=255)

                                                                        tCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTtgtg                             >  2:2440711/1‑100 (MQ=255)

                                                                        tCAAGCTGAAAATTGAAACACTGAACAAAAAAAATAATTAATGAATCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTtgtg                             <  2:3448512/100‑1 (MQ=14)

                                                                         cAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGa                            <  1:1842009/100‑1 (MQ=255)

                                                                         cAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGa                            >  1:2484442/1‑100 (MQ=255)

                                                                          aaGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAg                           <  1:2930876/100‑1 (MQ=255)

                                                                          aaGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAg                           >  2:4753949/1‑100 (MQ=255)

                                                                           aGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAgg                          <  2:1542745/100‑1 (MQ=255)

                                                                           aGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAgg                          <  1:3582819/100‑1 (MQ=255)

                                                                            gCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGt                         <  2:3827931/100‑1 (MQ=255)

                                                                             cTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGTGTTGGGATGtt                        >  1:1391377/1‑100 (MQ=255)

                                                                               gAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTaa                      >  2:400603/1‑100 (MQ=255)

                                                                               gAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTaa                      <  1:4810876/100‑1 (MQ=255)

                                                                                  aaTTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                   <  2:4529235/100‑1 (MQ=255)

                                                                                      gAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAATAAACATCTTCGGGTGGTGAGGTTAGGCGACTa               >  1:5115108/1‑100 (MQ=255)

                                                                                       aaaCACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTaa              <  2:600264/100‑1 (MQ=255)

                                                                                         acacTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGc            >  1:313738/1‑100 (MQ=255)

                                                                                          cacTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg           <  2:3100047/100‑1 (MQ=255)

                                                                                          cacTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg           <  1:4051252/100‑1 (MQ=255)

                                                                                            cTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa         >  1:381710/1‑100 (MQ=255)

                                                                                            cTGAACAATAAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGCGGATGGATCGCAAGAAACATCTTCTGGTTGTGAGGTTAAGCGACTAAGCGTa         <  2:1281358/100‑1 (MQ=14)

                                                                                             tGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTac        >  1:4705792/1‑100 (MQ=255)

                                                                                              gAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca       >  2:270920/1‑100 (MQ=255)

                                                                                              gAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca       >  1:3601318/1‑100 (MQ=255)

                                                                                              gAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca       >  1:4754687/1‑100 (MQ=255)

                                                                                              gAACAATGAAAGTTGTTCGTGAGTCACCCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTAGGGTTGTGAGGTTAAGCGACTAAGCGTaca       >  1:536194/1‑100 (MQ=255)

                                                                                                  aaTGAAAGTTGCTCGAGAGTATCTCAAATTTTCGCAACACGATGATGGATAGCAAGAAAAATCTTCGAGTTGTGATCTTAAGAGACTAAGCGTACACGGt   <  2:2359291/100‑1 (MQ=14)

GGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG  >  NC_000913/225586‑225784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.