New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3635910 =165 (1.050)23 (0.170) 17/174 13.7 13.7% intergenic (+17/+298) yhiM/yhiN acid resistance protein, inner membrane/putative oxidoreductase
?NC_000913 3635946 = 144 (1.040)intergenic (+53/+262) yhiM/yhiN acid resistance protein, inner membrane/putative oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 167 total aligned reads displayed.

GAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGT  >  NC_000913/3635811‑3636009
                                                                                                   |                                                                                                   
gaactCTAGTCGGCTTGGAAGCACTAAACATTACTTTGTTCTCAATCATTTCAATAATTAAACCAAGTTCTGCTAAAAAATAATTCCAACGTACCCGATa                                                                                                     <  2:3803533/96‑1 (MQ=255)
gAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATa                                                                                                     <  2:1121540/100‑1 (MQ=255)
  gTTCTGGGCAGTTCGGGAGCGGTATGCTTAACGTTGTTCTCAATCGTTTCAATATTGGAAGCGGGTTCTGCTAAAAAATAATTCCGACGTATCCGATcaa                                                                                                   >  2:3297825/1‑100 (MQ=255)
    tCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAAc                                                                                                 <  2:2583665/100‑1 (MQ=255)
    tCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAAc                                                                                                 <  2:3970315/100‑1 (MQ=255)
      tGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCa                                                                                               >  1:591086/1‑100 (MQ=255)
        gTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCACTATTAGAAGCGGGTTCTGCTCAAAAATACTTGCAACGTACTGGATAAAACCAGc                                                                                             >  2:2545339/1‑100 (MQ=255)
         tCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCg                                                                                            <  2:1542012/100‑1 (MQ=255)
         tCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCg                                                                                            <  1:2242293/100‑1 (MQ=255)
          cGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGt                                                                                           <  2:3553500/100‑1 (MQ=255)
            gTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCTGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGttt                                                                                         >  2:515380/1‑99 (MQ=255)
            gTTTGGGAGCGGTATGCTTTACGGTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTg                                                                                         <  2:3963887/100‑1 (MQ=255)
               tGGGAGCGGTATGCTTTACGTTGTTCTCACTGGTTTGACTATTATGCGCTGTTTCTGCTAAGAAATTTTTGCAACGTTCCGGATAAATCGAGCGTGGaac                                                                                      <  2:3681253/100‑3 (MQ=255)
               tGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGAcc                                                                                      <  1:1048448/100‑1 (MQ=255)
               tGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGAcc                                                                                      <  1:760457/100‑1 (MQ=255)
                tggAGTGGTAGGCTTTACGTTGTGCTCAAGGGTTTCAATATTATAAGCGTGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCa                                                                                     <  2:1962597/99‑1 (MQ=255)
                gggAGCGGTATGCTTTACGTTGTTCGCAATCGTTTCAATATTAGAAGGGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCa                                                                                     >  1:3646506/1‑100 (MQ=255)
                 ggAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGTCCAt                                                                                    <  2:3398780/100‑1 (MQ=255)
                    gCGGTATGCTTTACGTTGTTCTCGATCGGTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTg                                                                                 <  2:1689275/100‑1 (MQ=255)
                    gCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTg                                                                                 <  1:2092384/100‑1 (MQ=255)
                      tgTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               <  2:263667/99‑1 (MQ=255)
                      ggTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATGATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               <  2:1471958/100‑1 (MQ=255)
                      ggTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               >  1:2277982/1‑100 (MQ=255)
                      ggTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               >  2:2332138/1‑100 (MQ=255)
                      ggTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               <  1:3753705/100‑1 (MQ=255)
                      ggTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               <  2:971278/100‑1 (MQ=255)
                      ggTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAAGAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCg                                                                               <  1:3871516/100‑1 (MQ=255)
                      ggTATCCTTTACGGTTGTCTCAATCGTTTCAATATTAGAAATGGGTTCTGCGAAAAAATTATTGCAGCGTACCTGATAAAACGAACGGTTACCAttgcgt                                                                               >  2:1788959/1‑96 (MQ=255)
                       gTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGt                                                                              <  2:2730514/100‑1 (MQ=255)
                         ctGCTTAACGTTGTTATCAATCGTATCAATACTATATGCCGTTTCTGATACAAAATAATTGCAGCGCACCGGCTAAAACCAGCGTTGACCATTTGccgaa                                                                            <  2:1606324/99‑5 (MQ=255)
                           gCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACg                                                                          >  2:1137747/1‑100 (MQ=255)
                           gCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACg                                                                          >  1:1765554/1‑100 (MQ=255)
                            cTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGc                                                                         <  1:1004939/100‑1 (MQ=255)
                              ttAGGTTGGTCGCAATCGTTTCAAAATTAAAAGCGGGTTCTGCTAAAAAATAATTGCAACGCAACGTTTAAAACCAGCGTTGTCTATTTGCGTCACGCTg                                                                       >  2:2205990/1‑100 (MQ=255)
                               tACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTgg                                                                      <  2:102336/100‑1 (MQ=255)
                                 cGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGtt                                                                    <  1:4049336/100‑1 (MQ=255)
                                  gttgttCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGttt                                                                   >  1:1299597/1‑100 (MQ=255)
                                      ttCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCt                                                               <  1:4020137/100‑1 (MQ=255)
                                      ttCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCt                                                               <  2:3053294/100‑1 (MQ=255)
                                      ttCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCt                                                               <  1:3298350/100‑1 (MQ=255)
                                       tctcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCtt                                                              >  1:2632452/1‑100 (MQ=255)
                                       tctcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCtt                                                              >  1:2851650/1‑100 (MQ=255)
                                        ctcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTa                                                             >  2:2573477/1‑100 (MQ=255)
                                        ctcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTa                                                             >  1:3070252/1‑100 (MQ=255)
                                         tcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAg                                                            <  2:1004420/100‑1 (MQ=255)
                                         tcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAg                                                            <  1:1264250/100‑1 (MQ=255)
                                         tcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAg                                                            <  2:1188870/100‑1 (MQ=255)
                                         tcAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAg                                                            <  1:563043/100‑1 (MQ=255)
                                             tCGTTGCAATATTAGAAGAAAGAACAGAAAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGCcat                                                        <  2:3667697/100‑1 (MQ=255)
                                               gTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGcatca                                                      >  2:2442096/1‑100 (MQ=255)
                                               gTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGcatca                                                      >  2:899918/1‑100 (MQ=255)
                                                 ttCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATg                                                    >  2:78072/1‑100 (MQ=255)
                                                   cAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGaa                                                  >  2:2225249/1‑100 (MQ=255)
                                                   cAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGaa                                                  >  1:2002998/1‑100 (MQ=255)
                                                    aaTATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGaaa                                                 <  2:472055/100‑1 (MQ=255)
                                                    aaTATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGaaa                                                 >  1:1022341/1‑100 (MQ=255)
                                                      tatTAGAAGTGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATa                                               >  1:4074232/1‑100 (MQ=255)
                                                       atTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATaa                                              <  2:417497/100‑1 (MQ=255)
                                                       atTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGCTTTTCTTAGGCATCATGAAATaa                                              >  1:1191531/1‑100 (MQ=255)
                                                       atTAGAAGCGGGTTCTGCTAAAAAATAACTGCAACGTACCGTATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATaa                                              <  2:1878956/100‑1 (MQ=255)
                                                          aGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACgc                                           >  1:3301559/1‑100 (MQ=255)
                                                          aGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACgc                                           <  1:3395726/100‑1 (MQ=255)
                                                          aGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACgc                                           >  1:2382954/1‑100 (MQ=255)
                                                           gAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACgca                                          >  2:3411678/1‑100 (MQ=255)
                                                           gAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACgca                                          <  2:3024598/100‑1 (MQ=255)
                                                              gCGGGTTCTGCTAGAAAATAATTGCAACGTACCGGATAAAACCAGCGTTTACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACgcagca                                       <  1:3677240/100‑1 (MQ=255)
                                                               cGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCAt                                      >  1:2955288/1‑100 (MQ=255)
                                                                ggattCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGGGTAACGCTTGTTTTTCTTAGGCATCATGAAATAACGCAGCAtt                                     <  2:3695502/97‑1 (MQ=255)
                                                                  gTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTaa                                   >  1:11364/1‑100 (MQ=255)
                                                                   ttCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAAt                                  <  2:1529164/100‑1 (MQ=255)
                                                                     cTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGc                                <  1:2682912/100‑1 (MQ=255)
                                                                       gCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCAt                              >  1:83400/1‑100 (MQ=255)
                                                                       gCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCAt                              <  1:2801428/100‑1 (MQ=255)
                                                                        cTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTGTTAGGCATCAGGAAATAACGCAGCATTAATGCATa                             >  2:647304/1‑100 (MQ=255)
                                                                        cTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATa                             >  2:1061535/1‑100 (MQ=255)
                                                                        cTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATa                             >  2:1207510/1‑100 (MQ=255)
                                                                        cTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTGTCTTAGGCATCATGAAATAACGCAGCATTAATGCATa                             >  2:3639385/1‑100 (MQ=255)
                                                                         tAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAg                            >  1:883821/1‑100 (MQ=255)
                                                                         tAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAg                            >  2:2889888/1‑100 (MQ=255)
                                                                          aaaaaaTAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGt                           <  2:2077474/100‑1 (MQ=255)
                                                                           aaaaaTAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTg                          <  1:3085563/100‑1 (MQ=255)
                                                                             aaaTAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGt                        >  2:2765649/1‑100 (MQ=255)
                                                                                 aagtGCATCGTACCGGATAAGACCGGCGTTGACCATATGCGTAACGCTGGTTTTTCTTAGCCAATATGAACTAACGCAGTATTAATGCATAGTGGTTAAg                    <  2:3215086/97‑1 (MQ=255)
                                                                                    tGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGtat                 >  1:2831762/1‑100 (MQ=255)
                                                                                       aaCGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATaaa              >  2:3445191/1‑100 (MQ=255)
                                                                                        aCGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATaaaa             >  2:2410597/1‑100 (MQ=255)
                                                                                        aCGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGGTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATaaaa             <  1:3339523/100‑1 (MQ=255)
                                                                                          gTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATaaaaaa           >  2:1789746/1‑100 (MQ=255)
                                                                                           tACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTTTTAGTCTTTTTGAAATAACGCAGCATTAATGCATAGTGTTTAAGTATAAAAAAc          >  2:1911680/1‑100 (MQ=255)
                                                                                           tACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAAc          <  2:281354/100‑1 (MQ=255)
                                                                                            aCCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACa         <  1:1868229/100‑1 (MQ=255)
                                                                                            aCCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACa         <  2:728307/100‑1 (MQ=255)
                                                                                            aCCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACa         <  1:1673586/100‑1 (MQ=255)
                                                                                             ccGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAg        >  1:20117/1‑100 (MQ=255)
                                                                                             ccGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAg        <  1:1083482/100‑1 (MQ=255)
                                                                                                gATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCaa     >  1:3880181/1‑100 (MQ=255)
                                                                                                gATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCaa     >  2:3771510/1‑100 (MQ=255)
                                                                                                 aTAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCaaa    >  1:543986/1‑100 (MQ=255)
                                                                                                  tAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAg   >  1:1431607/1‑100 (MQ=255)
                                                                                                   aaaaCCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGt  >  2:1656919/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGT  >  NC_000913/3635811‑3636009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.