| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,765,971 | IS2 (+) +5 bp | coding (3789‑3793/4134 nt) | rhsA → | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3186096 = | NA (NA) | 158 (1.010) | 97/198 | 0.2 | 96.2% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 3765975 | 6 (0.040) | coding (3793/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 3187426 | NA (NA) | 158 (1.010) | 84/198 | 0.8 | 96.2% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3765971 = | 6 (0.040) | coding (3789/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
Only 100 of 320 total aligned reads displayed.
TATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATC > NC_000913/3765876‑3766074 | tATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTg < 2:1403529/100‑1 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGca > 1:112817‑M2/94‑100 (MQ=255) cAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtag > 1:2954856‑M2/1‑97 (MQ=255) gTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagac > 2:3484565‑M2/1‑95 (MQ=255) tATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagact > 1:375513‑M2/1‑94 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcccCCCTGCAcagc < 2:3876946‑M2/11‑1 (MQ=255) gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCAcagca > 1:3434998‑M2/89‑100 (MQ=255) gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCAcagca < 1:3650804‑M2/12‑1 (MQ=255) gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCAcagca < 1:1199641‑M2/12‑1 (MQ=255) cGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggcc > 1:449623‑M2/1‑90 (MQ=255) cGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggcc > 1:1842407‑M2/1‑90 (MQ=255) ttGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCagcaag < 1:1501821/100‑1 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgtgttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagc < 2:3815598‑M2/18‑1 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagc > 1:423054‑M2/83‑100 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagc < 1:870874‑M2/18‑1 (MQ=255) gctcgcaacgggaatatctgcggcagcgggcttgtgatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagc < 2:2804755‑M2/18‑1 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagca > 2:2290171‑M2/82‑100 (MQ=255) aaTCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctg > 2:273986‑M2/1‑85 (MQ=255) cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAga < 1:4059380‑M2/21‑1 (MQ=255) gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgat > 2:2486070‑M2/79‑100 (MQ=255) gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgat < 1:3918661‑M2/22‑1 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatg > 1:2467472‑M2/78‑100 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggtgcaaatccaCCCTGCACAGCAGCAAGCagatgatn < 1:1048112‑M2/26‑2 (MQ=255) tACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctcca > 1:77688‑M2/1‑77 (MQ=255) ggaatatctgcggcagcgggcttgtaatgggttaagtgataatagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAAt < 2:333660‑M2/28‑1 (MQ=255) cGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccaga < 1:3063027‑M2/100‑26 (MQ=255) atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAAtgctgc < 1:3036759‑M2/33‑1 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaattataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATaatgctgcga > 2:3981999‑M2/66‑98 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCaa > 2:2153073‑M2/66‑100 (MQ=255) aCAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaacn > 1:3245513‑M2/1‑70 (MQ=255) gATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaat < 2:478128‑M2/100‑34 (MQ=255) ctctGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatca < 2:2555862‑M2/100‑38 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatgcaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTg < 2:434414‑M2/43‑1 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTTGCTCAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTg < 2:3752132‑M2/43‑1 (MQ=255) cgggattgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGa > 2:1479075‑M2/57‑100 (MQ=255) tGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcactt < 1:3009499‑M2/100‑41 (MQ=255) ttAGATGTTTTTCCTAGGCCAGTCGCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagaccggccccctgcatctccatacaaccgatatcgcttaaata > 2:3291991‑M2/1‑55 (MQ=255) ttAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagaccggccccctgaatctccagacaaccaatatcacttaaata > 1:949604‑M2/1‑55 (MQ=255) tAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataa > 1:1770719‑M2/1‑54 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAAtg > 1:3482274‑M2/50‑100 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAAtg > 1:2052956‑M2/50‑100 (MQ=255) gAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagt > 1:334176‑M2/1‑52 (MQ=255) tgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAAtggtgg < 1:741121‑M2/55‑1 (MQ=255) aGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTCtagactggccccctgaatctccagacaaccaatatcacttaaataagtga < 2:1673477‑M2/100‑51 (MQ=255) gTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 1:3454605‑M2/100‑52 (MQ=255) gTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactgcccccctgaatctccagacaaccaatatcacttaaataagtgat < 1:1312675‑M2/100‑52 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGaa > 1:1574688‑M2/44‑100 (MQ=255) ttttCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 1:2775625‑M2/1‑47 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAAc > 1:1648248‑M2/43‑100 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAAc < 1:2289254‑M2/58‑1 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAAc < 1:106639‑M2/58‑1 (MQ=255) ttCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttatttaagtgatattg > 1:1920997‑M2/1‑45 (MQ=255) ttCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc > 2:1231085‑M2/1‑45 (MQ=255) tCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcn > 2:3576804‑M2/1‑44 (MQ=255) ccTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttatttaagtgatattggt > 2:2340622‑M2/1‑43 (MQ=255) gtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATAc > 1:1417907‑M2/38‑100 (MQ=255) cTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta < 2:1207944‑M2/100‑59 (MQ=255) tgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACa > 2:2650527‑M2/37‑100 (MQ=255) aGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat > 1:2027110‑M2/1‑40 (MQ=255) gACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata > 2:721326‑M2/1‑39 (MQ=255) gACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata < 1:1979708‑M2/100‑62 (MQ=255) ataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGc > 1:350268‑M2/35‑100 (MQ=255) ccATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact > 1:1000888‑M2/1‑37 (MQ=255) ccATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact < 1:1695013‑M2/100‑64 (MQ=255) acagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATc > 1:642903‑M2/32‑100 (MQ=255) acagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATc < 1:520167‑M2/69‑1 (MQ=255) acagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATc < 2:2321799‑M2/69‑1 (MQ=255) agatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATcac < 2:1363523‑M2/71‑1 (MQ=255) ccccTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactcgttt < 1:2823434‑M2/100‑69 (MQ=255) tgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACaaa < 1:978503‑M2/74‑1 (MQ=255) ccTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 1:503213‑M2/1‑30 (MQ=255) ttGCCCATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:3864845‑M2/1‑28 (MQ=255) ttGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 2:110455‑M2/1‑28 (MQ=255) ctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGaa > 2:1250010‑M2/24‑100 (MQ=255) tGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 1:1793‑M2/100‑74 (MQ=255) gCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac < 2:2592717‑M2/100‑75 (MQ=255) aatatagggggaaatccaCCCTGCACAGCAGCAAGGAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATAttt < 2:514911‑M2/82‑1 (MQ=255) aaTTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag < 2:3049713‑M2/100‑78 (MQ=255) gtataggggaagatccaCCCTGCACAGCAGCAAGCAGGTGATAATGATGCAAAAGCAGTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTg < 2:1061627‑M2/83‑1 (MQ=255) atataggggcaaatccaCCCGGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTg < 2:3669981‑M2/83‑1 (MQ=255) ttCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc > 2:1707523‑M2/1‑21 (MQ=255) taggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGAct > 2:3234762‑M2/15‑100 (MQ=255) cATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt > 1:3582314‑M2/1‑18 (MQ=255) aTGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg > 2:2248407‑M2/1‑17 (MQ=255) ggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGActctct > 1:2527377‑M2/11‑100 (MQ=255) ggcaaatacaCCCTGCACAGCAGCAAGCAGATGATAATGCTACAAAAGCATTGACAAAATGGTGGAACGATAAAGCATCACAAAGAATATTTGActctct > 1:2892866‑M2/11‑100 (MQ=255) gcaaatcctCCCGGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTa < 2:2924062‑M2/91‑1 (MQ=255) gCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag < 2:284816‑M2/100‑87 (MQ=255) caaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTaa < 2:3199609‑M2/92‑1 (MQ=255) ccAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa < 1:134397‑M2/100‑89 (MQ=255) atccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAatat > 1:3302824‑M2/6‑100 (MQ=255) nccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATAtt > 1:210003‑M2/5‑100 (MQ=255) ccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTg < 2:1967629‑M2/97‑1 (MQ=255) cccTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga < 1:2236986‑M2/100‑96 (MQ=255) cccTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGaat < 2:3525067/100‑1 (MQ=255) cTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt < 2:580787‑M2/100‑98 (MQ=255) cTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTtaataa > 2:1731245/1‑100 (MQ=255) tGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg > 1:2356462‑M2/1‑2 (MQ=255) tGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg > 1:3093963‑M2/1‑2 (MQ=255) tGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg < 1:584808‑M2/100‑99 (MQ=255) | TATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATC > NC_000913/3765876‑3766074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |