| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,765,971 | IS2 (+) +5 bp | coding (3789‑3793/4134 nt) | rhsA → | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3186096 = | NA (NA) | 158 (1.010) | 97/198 | 0.2 | 96.2% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 3765975 | 6 (0.040) | coding (3793/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 3187426 | NA (NA) | 158 (1.010) | 84/198 | 0.8 | 96.2% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3765971 = | 6 (0.040) | coding (3789/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
Only 100 of 322 total aligned reads displayed.
TTTTTATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAAT > NC_000913/3765872‑3766070 | tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccac > 1:3333514‑M2/100‑100 (MQ=255)tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccac < 1:2045787‑M2/1‑1 (MQ=255) ttttATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGcc < 1:970472/100‑1 (MQ=255) tATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTg < 1:2796490/100‑1 (MQ=255) aTCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGt > 2:267179‑M2/1‑99 (MQ=255) cAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtag > 1:2954856‑M2/1‑97 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGcaca < 2:2770766‑M2/9‑1 (MQ=255) tATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagact > 1:595909‑M2/1‑94 (MQ=255) tATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagact > 1:375513‑M2/1‑94 (MQ=255) gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCAcagca < 1:3650804‑M2/12‑1 (MQ=255) tCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactgg > 1:1480978‑M2/1‑92 (MQ=255) tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACagcagc > 1:168161‑M2/87‑100 (MQ=255) cGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggcc > 1:449623‑M2/1‑90 (MQ=255) cGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggcc > 1:1842407‑M2/1‑90 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagc > 1:423054‑M2/83‑100 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtgtgaaaatataggggcaaatccaCCCTGCACAGGagcaagca > 1:3905722‑M2/82‑100 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCagcaagca > 2:2290171‑M2/82‑100 (MQ=255) cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAga < 1:4059380‑M2/21‑1 (MQ=255) cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAga > 2:1068005‑M2/80‑100 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatg < 2:449180‑M2/23‑1 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatg > 1:2467472‑M2/78‑100 (MQ=255) ccAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaat < 1:11777‑M2/100‑19 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatga > 2:1054209‑M2/77‑100 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatga > 2:1729603‑M2/77‑100 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatga > 1:2286757‑M2/77‑100 (MQ=255) cAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatc > 2:2242422‑M2/1‑81 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAgatgat < 1:1737915‑M2/25‑1 (MQ=255) gTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctc > 1:3114694‑M2/1‑79 (MQ=255) tACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctcca > 1:77688‑M2/1‑77 (MQ=255) tACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAAt > 2:406937/1‑100 (MQ=255) atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAAtgctgc < 1:1311567‑M2/33‑1 (MQ=255) tctgcggcagcgggcttgtaacgggctaagtgataagagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCa < 2:3783784‑M2/34‑1 (MQ=255) aCAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagagaacc > 2:3380234‑M2/1‑70 (MQ=255) cAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaacca < 2:3253426‑M2/100‑32 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCAt > 2:1893245‑M2/60‑100 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaagccaCCCTGCAGAGCAGCAAGCAGATGATAATGCTGCAAAAGCAt < 2:2929120‑M2/41‑1 (MQ=255) ctctGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatca < 2:2555862‑M2/100‑38 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCATGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTg < 2:1707284‑M2/43‑1 (MQ=255) tGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcactt < 2:2498544‑M2/100‑41 (MQ=255) tGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcactt < 1:3009499‑M2/100‑41 (MQ=255) ggTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaan > 1:3247755‑M2/1‑57 (MQ=255) ggTTAGAAGTCTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaa < 1:3572900‑M2/100‑44 (MQ=255) cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACaaa > 1:337267‑M2/53‑100 (MQ=255) gTTAGAAGTTATTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaat < 2:3680903‑M2/100‑45 (MQ=255) ttAGATGTTTTTCCTAGGCCAGTCGCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagaccggccccctgcatctccatacaaccgatatcgcttaaata > 2:3291991‑M2/1‑55 (MQ=255) ttAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaata > 1:527407‑M2/1‑55 (MQ=255) ttAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaata > 1:3032073‑M2/1‑55 (MQ=255) ttAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagaccggccccctgaatctccagacaaccaatatcacttaaata > 1:949604‑M2/1‑55 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAAtg > 1:3482274‑M2/50‑100 (MQ=255) aaGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtg > 2:555027‑M2/1‑51 (MQ=255) aaGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtg > 1:1060282‑M2/1‑51 (MQ=255) tgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAAtggtgg < 1:741121‑M2/55‑1 (MQ=255) tgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAAtggtgg < 1:888620‑M2/55‑1 (MQ=255) gTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 1:3454605‑M2/100‑52 (MQ=255) gTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGACCTGtcgactggccccctgaatctccagacaaccaatctcacttaaataagtgat < 2:2400514‑M2/100‑52 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGaa < 2:2326726‑M2/57‑1 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGaa > 1:1574688‑M2/44‑100 (MQ=255) ttttCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 2:3495759‑M2/1‑47 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAAc > 1:1648248‑M2/43‑100 (MQ=255) tttCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagacttgccccctgaatctccagacaaccaatatcacttatttaagtgatatt > 2:3934918‑M2/1‑46 (MQ=255) ttCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc > 2:1231085‑M2/1‑45 (MQ=255) cTAGACCAATCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactgaccccctgaatctccagacaaccaatatcccttaaataagtgatagtctta < 2:3840671‑M2/100‑59 (MQ=255) aGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat > 1:2027110‑M2/1‑40 (MQ=255) gACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata > 2:721326‑M2/1‑39 (MQ=255) gACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata < 1:1979708‑M2/100‑62 (MQ=255) ataacagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGc > 1:350268‑M2/35‑100 (MQ=255) ccATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact > 1:1000888‑M2/1‑37 (MQ=255) acagatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATc < 2:2035511‑M2/69‑1 (MQ=255) agatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATcac < 2:1363523‑M2/71‑1 (MQ=255) tCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt < 2:1414645‑M2/100‑68 (MQ=255) gatgtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATcaca < 2:1650403‑M2/72‑1 (MQ=255) ccccTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt < 1:68216‑M2/100‑69 (MQ=255) ccccTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt < 1:1898874‑M2/100‑69 (MQ=255) gtctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAg < 2:497017‑M2/75‑1 (MQ=255) ccTTGCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 1:503213‑M2/1‑30 (MQ=255) ttGCCCATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:3864845‑M2/1‑28 (MQ=255) ttGCCAATGCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 2:3077160‑M2/1‑28 (MQ=255) ctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGaa < 1:3055508‑M2/77‑1 (MQ=255) ctggaaatataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGaa > 2:1250010‑M2/24‑100 (MQ=255) gCCAATTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac < 2:2592717‑M2/100‑75 (MQ=255) cAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATAtt > 1:1778160/1‑100 (MQ=255) atataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTg < 2:3580371‑M2/83‑1 (MQ=255) aTTCCATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 1:2861610‑M2/1‑22 (MQ=255) ataggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGAc < 2:2822448‑M2/85‑1 (MQ=255) ccATGGCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat < 1:2751279‑M2/100‑82 (MQ=255) ggggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGActct > 2:1530643‑M2/13‑100 (MQ=255) ggcaaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGActctct > 1:2527377‑M2/11‑100 (MQ=255) gCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag > 2:3535466‑M2/1‑14 (MQ=255) gCCCAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag < 2:284816‑M2/100‑87 (MQ=255) cccAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga < 1:2211304‑M2/100‑88 (MQ=255) cccAAAAGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga < 1:3305222‑M2/100‑88 (MQ=255) caaatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTaa < 2:3199670‑M2/92‑1 (MQ=255) naatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAat > 1:3958663‑M2/8‑100 (MQ=255) aatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAata > 1:1100620‑M2/7‑100 (MQ=255) aatccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAata > 1:1029937‑M2/7‑100 (MQ=255) aaaaGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaataatagtttttagactagtcattggagaaca < 2:1212348‑M2/100‑91 (MQ=255) nccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATAtt > 1:210003‑M2/5‑100 (MQ=255) aaaGCCCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag < 1:1341603‑M2/100‑92 (MQ=255) ccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTg < 1:2325687‑M2/97‑1 (MQ=255) ccaCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTg < 1:1394549‑M2/97‑1 (MQ=255) | TTTTTATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAAT > NC_000913/3765872‑3766070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |