New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2432323 =35 (0.780)4 (0.090) 4/264 NT 11.2% coding (618/1269 nt) folC bifunctional folylpolyglutamate synthase/ dihydrofolate synthase
?NC_000913 2432375 = 30 (0.700)coding (566/1269 nt) folC bifunctional folylpolyglutamate synthase/ dihydrofolate synthase

TGCGGGACAAGCGGCAACGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATA  >  NC_000913/2432177‑2432470
                                                                                                                                                  |                                                                                                                                                   
gacgtggtgattctggaagtagggctgggcggtcgtctggacgcaaccaatattgtcgacgccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagcAgg                                                                                                                                                   >  2:795085‑M1/147‑149 (MQ=255)
gacggggtgattctggaaggagggctgggcggtcgtctggacgcaaccaatattgtcgacgccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagcAgg                                                                                                                                                   >  1:375567‑M1/147‑149 (MQ=255)
   gggACAAGCGGCAACGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTTCACTCAACGCCCCGACGTTGTAACAGTGAACCTTTTTCTTGCGCCACATCAGCAATGGTAGAAGGcct                                                                                                                                                >  2:162532/1‑147 (MQ=255)
   gggACAAGCGGCAACGGCAGATTTTCCAGCGTGACGTAAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCAt                                                                                                                                                >  1:509483/1‑149 (MQ=255)
      aCAAGCGGCAACGGCAGGTTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGGGACGGAATAGTTCCACTCAACGCCCCTACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTc                                                                                                                                             <  2:552151/149‑1 (MQ=255)
       cAAGTGGCAACGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTCCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTcc                                                                                                                                            <  1:473062/149‑1 (MQ=255)
                 cGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGa                                                                                                                                  <  1:726472/149‑1 (MQ=255)
                 cGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGa                                                                                                                                  <  2:268403/149‑1 (MQ=255)
                 cGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGa                                                                                                                                  <  1:643928/149‑1 (MQ=255)
                 cGGCAGATTTCCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGa                                                                                                                                  <  1:685046/149‑1 (MQ=255)
                    cAGATTTTCCCGCGTGCCGTGATCATCGCTAAACGCCCCGTCATTATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACaa                                                                                                                               <  2:620196/149‑1 (MQ=255)
                      gATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTCGAAGGCATTTCCGGCTCCCCCGCAAtt                                                                                                                             >  1:311801/1‑149 (MQ=255)
                       gctgggcggtcgtctggacgcaaccaatattgtcgacgccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagcAGGCATTTCCGGCTCACCGACAATTg                                                                                                                            <  1:139583‑M1/26‑1 (MQ=255)
                            ccAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCTCCGACAATTTCCGGt                                                                                                                       >  1:21135/1‑149 (MQ=255)
                                      gTGAGCAGCTCTAAACGCCCAGGCATGATCGCTGACGGGATAGTTCCACTCCACGCCACGACGTTGTAACAGTTCACCTTTGTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGc                                                                                                             <  1:708489/149‑1 (MQ=255)
                                            aTCGCTTAACGCCCAGGCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGa                                                                                                       <  1:651748/149‑1 (MQ=255)
                                            aTCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGa                                                                                                       >  1:449469/1‑149 (MQ=255)
                                             tCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGCTTTTCGCTGCGGAAGAt                                                                                                      >  2:42266/1‑149 (MQ=255)
                                                 atattgtcggcgccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagcAGGCATTTCCGGCTCACCAACAATTGCCGGTTTTTCGCTGCGGAAGATGCCt                                                                                                  >  2:434555‑M1/98‑149 (MQ=255)
                                                     cGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAGCAGTGCACCTTTTTCCTGCGCCCCATCAGCAATGGTAGAAGGCATTTCCAGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCtt                                                                                              >  2:356468/1‑149 (MQ=255)
                                                      gCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGGTTTTCGCTGCGGAAGATGCCTGCttt                                                                                             >  2:373241/1‑149 (MQ=255)
                                                        ccAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTtctc                                                                                          <  1:120423/149‑1 (MQ=255)
                                                         gacgccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagaAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTtctc                                                                                          >  1:170236‑M1/90‑149 (MQ=255)
                                                           gTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgc                                                                                        <  1:614666/149‑1 (MQ=255)
                                                           gTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgc                                                                                        <  2:477165/149‑1 (MQ=255)
                                                            gccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagcAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgcg                                                                                       >  2:139583‑M1/87‑149 (MQ=255)
                                                             cATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGTCGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCCCCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgcgc                                                                                      <  2:738331/149‑2 (MQ=255)
                                                                 acgggTGACCGGATAGGTGCACTCAACGCCCCGCCGTTGTAACGGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCaa                                                                                  <  2:472819/146‑1 (MQ=255)
                                                                            aaTAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGa                                                                       <  2:581413/149‑1 (MQ=255)
                                                                                 ttCCACTCAACGCCCCGACGTTGTGACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTgg                                                                  >  1:595488/1‑149 (MQ=255)
                                                                                 ttCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTACCGGTTTTTCGCTGCGGAAGATGCCCGCTTTCTCGCGACCAAACCTCTCGCGATCTgg                                                                  >  2:268743/1‑149 (MQ=255)
                                                                                     aCTCAACGCCCCGACGTTGTAACAGTGCGCCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATCTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGAccc                                                              >  1:481599/1‑149 (MQ=255)
                                                                                     aCTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGAccc                                                              >  1:175390/1‑149 (MQ=255)
                                                                                                cGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGTACGCAAACACGGCGATCCGCCAAGTGCCGGTTTTTCGCTGCAGAAGATGCGTGCTTTCTCGGGACCAATACTTTCGCGATCTGGACCGCGCCAGACggc                                                   >  2:332783/1‑148 (MQ=255)
                                                                                                cGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGt                                                   >  2:707613/1‑149 (MQ=255)
                                                                                                         aaCAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAg                                          <  1:649499/149‑1 (MQ=255)
                                                                                                          aCAGTGCACCTGTTTCCTGCGCCCCCTCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAgc                                         <  2:237786/149‑1 (MQ=255)
                                                                                                                        tCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTtac                           <  1:128862/149‑1 (MQ=255)
                                                                                                                          cTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGAACCAGCCAGTCGGTATTTTCCAGCGCTATACTGGTtacta                         <  2:73571/149‑1 (MQ=255)
                                                                                                                              gcCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTCTGATCCAGCGCAATACTGGTTACTACcgc                     >  1:468417/1‑149 (MQ=255)
                                                                                                                              gcCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGATGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCCGCCAGTCGGTATGATCCGGCGCAATACTGGGTACCACagc                     >  2:464766/1‑149 (MQ=255)
                                                                                                                                    tCAGCAATGGTAGAAGGCACTGCCGCTCCCCCGACAATTGCCGTTTTCCCGCTGCGGATGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATc               <  2:317970/149‑1 (MQ=255)
                                                                                                                                                 aaGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAata  <  1:373241/149‑1 (MQ=255)
                                                                                                                                                 aaGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAata  <  1:460486/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TGCGGGACAAGCGGCAACGGCAGATTTTCCAGCGTGCCGTGAGCATCGCTAAACGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATA  >  NC_000913/2432177‑2432470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.